Pseudomonas aeruginosa BWH050, V551_04788 (sbcB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH050 adTzs-supercont1.6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATCATCTGGCCGACCGCGAAGGCGATGGGATCGGCCTCGCTCATCAGGCCGATACCGCCGAAGAGCAGGGTGAGGATGAAGGTGATGGTCTGGATCACC ACGCTGTAGACCACGAAGGCGCCGATCAGGATGCCTTTGACGCCCTTGATCTTGGCCCAGGCTTCGCTGATCACGTCGCCGATGCGGAAGTCGTAGTCGC CGATGACCGGCGGCACCGCCTGGGTCGGTTGCAGGGCGCTGGCGGGGGTGGCGTAGGGATTGCTGGTGTCGTTCATGGTGCTGTCCTTGTCAGTGAAACG GGCATCCGTGCGAGCGGAATGCTAGCGAGGGCGGAGGGGACAACGCAAGGTTCGGATGGCAGATATGCGCACTGACGCGCCCTGGCGGGCTGTGCCTACG GCGCTTTCCGTGAGTTCGTTGGAAAACCTGGAAATCCCCGAAGTGGGTCGCGAGCTTCGCGGCAGTCACTGGTAGACTGCCCGGTGCCGCCAGAAAGGGA
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| DNA Sequence for Gene |
>V551_04788
|sbcB
ATGACCGTGAACGCGAGTATTTTTTGGTACGACTACGAAACCACCGGCATCGACCCTCGCCGCGACCGGCCGTTGCAGATCGCCGGGATCCGCACGGACG AGGCGCTGAACGAGATCGGCGAGCCGATGAACCTGTATTGCCGTCCCAGCGACGATATCCTGCCTCACCCTATGGCTTGCCTGATCACCGGCATCACTCC CCAGCGGCTGGCCGAGCGGGGGCTGTCCGAGGCCGACTTCATGACCCGGGTACACGCCCAGCTGGCGCAGCCGGCGACCTGCGTGGCCGGCTACAACTCC CTGCGCTTCGACGACGAAGTGACGCGCTACAGCCTGTACCGCAACTTCTTCGATCCCTACGCCCGCGAGTGGCAAGGCGGCAATAGCCGCTGGGACCTGA TCGACATGGTCCGTACCGCCTATGCCCTGCGCCCGGAGGGCATCCAGTGGCCGCAGCTGGACGGCCGGCTGTCGCTGAAGCTGGAAATGCTCACCGCGGC AAACGGCCTGGAGCATGGCCAGGCCCACGACGCGCTTTCCGATGTCCGCGCCACCATTGCCCTGGCCCGCCTGATCCGTCAGCGCCAGCCGCGCCTGTAC GATTACCTCTACCAATTGCGCAGCAAGCACAAGGTGCTCGACCAGGTGCGCCTGCTGCAGCCGCTGGTGCATGTCTCCGGACGCTTTTCCGCGGAGCGCC ATTTCCTCTCGGTGGTCCTGCCGCTGGCCTGGCACCCGCGCAACCGCAATGCCCTGATCGTCTGCGACCTCTGCGCCGATCCCGCGCCGCTGCTGGAGTT GTCGGCCGAAGACTTGCGCAGGCGCCTGTATACCCGTCGCGACGAACTGGCCGAGGGCGAGTTGCCGGTGCCGCTGAAGCAGATCCAGGTCAACCGTTGC CCGGTGGTGGCGCCGCTGTCGGTATTGCGCGCCGAGGATCGCCAGCGAACCGGCATCGAACTCGAGGAGTGCCAGCGAAAAGCCGAGTTGTTGCGCCAGC ATCAAACCGTCTGGGCGGACAAACTGACAGCGCTATATGGCGAAGAAAGTTTCTCCGCCAGCGACGACCCCGAGCAACAGTTGTATGACGGATTTATTGG CGATCGGGATCGACGCCTTTGTGAACAGCTGCGCCTTGCCGAACCGGAGCAATTGGCCAAAGAACAATGGCCCTTCGACGATGCCCGTTTGCAGGAGTTG TTCTTCCGCTATCGTGCGCGAAATTTCCCGGAAACTTTAAATGTGGACGAGCGCCAACAATGGGAAAGCTTCTGCCGCAATCGTTTGTCCCATGAAGAAT ACGGCGCACCGAATACTTTGCCGGCCTTCGAGGCGGCGCTGGAGGCTTGTCGGCAAGAGCAGGGCGGCACATTGCCGGCGGTACTTGCGGCCTGGCGCGA TTACGCCGCGGAACTGCGTCAACGCTATTCGCTGGAGACTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGACGCAGGCAGAGGAGTCGGTACGATCCGGCGGAAATGAAAAACGCCAGCACTGGGCTGGCGTTCTTCGTGGAACTGACTGGTTTAGCCGAGCAGGGTG GCCCAGCTCTCGACGGCCTCGGGGCCCCACTTGGCTTTCCACTCTTTCAAAGTCTTGTGGTTGCCGCCCTTGGTCTCGATGACTTCGCCGGTGTGCGGGT TCTTGTACTGCTTGACCTTGCGCGCGCGCTTGCCGGCAGGCGCCTTGGCGGTGCGGGTGCTCTTGCCGATCTTGGCGTCCGGATCGAGCAGGGAAATCAC GTCACGCAGGGACTTCTGGTAAGTGCCCATCAGCGTGCGCAGCTTCTCTTCGAATTCCAGTTCTTTTTTCAGTTTGTCGTCTTGTTCCAGGGACTTCAGG CGCTCCTGAAGTTCCTTGATGGCTTCTTCCGTGGCGCGATATTCGTTGATCAGGGACATGTCAGGTACCTTGTCTGTGCTGAGTGGCGGTGGCGGGCATG
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| Amino Acid Sequence |
>exonuclease I
MTVNASIFWYDYETTGIDPRRDRPLQIAGIRTDEALNEIGEPMNLYCRPSDDILPHPMACLITGITPQRLAERGLSEADFMTRVHAQLAQPATCVAGYNS LRFDDEVTRYSLYRNFFDPYAREWQGGNSRWDLIDMVRTAYALRPEGIQWPQLDGRLSLKLEMLTAANGLEHGQAHDALSDVRATIALARLIRQRQPRLY DYLYQLRSKHKVLDQVRLLQPLVHVSGRFSAERHFLSVVLPLAWHPRNRNALIVCDLCADPAPLLELSAEDLRRRLYTRRDELAEGELPVPLKQIQVNRC PVVAPLSVLRAEDRQRTGIELEECQRKAELLRQHQTVWADKLTALYGEESFSASDDPEQQLYDGFIGDRDRRLCEQLRLAEPEQLAKEQWPFDDARLQEL FFRYRARNFPETLNVDERQQWESFCRNRLSHEEYGAPNTLPAFEAALEACRQEQGGTLPAVLAAWRDYAAELRQRYSLET
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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