Pseudomonas aeruginosa BWH050, V551_03895
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH050 adTzs-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGACGCGCTCGACTTCGCGAGCGATCAGGCCATAGCAGACGTAGTTGAGGCCGCTGCCGCCGTAGGCTTCGGGAATGGTCGCGCCGAGCAGGCCGGTCTC GCCCATCTCGCGGAAGATCTTCGGGTCGGTCTGTTCGTGGCGGAAGGCTTCGAGCACGCGCGGGGCCAGCTTGTCTTGGGCGAACTGCTGGGCGCTGTCG CGAACCATGCGCTCTTCTTCGGTGAGCTGCTGGTCCAGCAGCAGGGGGTCTTCCCAGTTGAAGCTAGCTTTGGTGGCCATGCGTACATCCTCGTCAAGCG GTAGCGGAGGCTGGCGTGGGCCAGCCGGAATGGAAGCATCCTAAGAGCCTAGCGAATGGGGCGGCAAACGAGGAATTCGCACGCACTTGTGCTATTTTCT CACTCCGAGAAAATGAGTCTCGTATTTCATGCCCTTGAAGAGGCGCGAGGAATCGTGACCTGGGCGTCATAGATGCGAAACCGGCACTCCAGAGTCCTCC
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| DNA Sequence for Gene |
>V551_03895
ATGCGACGCAAGATCCCTTCCACCGCCGCGCTGGTCAGCTTCGAGTCCGCCGCGCGCCACGAGAGCTTCACCAAGGCGGCGGAGGAGTTGTCCCTGACCC AGAGCGCGATCTGCCGGCAGATCGCCACGCTCGAGGAGTTCCTCGGTGTCGAGCTGTTCCGTCGCTCGCGGCGCGGGGTCAAGCTCACCGAGGCCGGGCT GTCCTATAGCCGGCGGGTGGCGGTACGCCTCGACGCGGTGGAGCGCGACACCCTGGCGGTGATGGGGCACCAGGGCGGCGGCGCGATCGAACTGGCGGTG GTGCCGACCTTCGGCACCCAATGGCTGTTGCCGCGGCTCAAGCGCTTCCAGCGGCTGCACCCGGAGGTCACGATCAACCTGACCAACCGCACCCGCCCGT TCCTCTTCGCCGACACCGAGTTCGACGCCGCGCTGTACTTCGGCGACGCCGACTGGTCGGGTACCGTCTCGCATTTCCTGATGCGCGAGAATCCGGTGCC GGTGTGCAGCCCGGAGCTGCTGGGCGGGCGTCGAACGCTGAGCGCCGAGCAGGTCGCCGGGCTGCCGCTGATGCAGCAGAGCACCCGGCCCTACGCTTGG CGCCAGTGGTTTCACTCCCAGGGACTGAACGTCGCCCACGACATGAGCGGGCCGCGCTACGAGCTGTTCTCCATGCTTGCCCAGGCGGCCATGCACGGCA TGGGCGTGGCCCTGATACCGCCCTTCCTGATCCAGGACAAGCTGGCCGACGGAAGGCTTATCGTGCCCATGCAACATGCCTATTTGAGCGAGAATGCGTA TTACCTGATCATTCCCGAGCGCAGGGTCGAATCGGCGATGCTCAATGCCTTCCGCGACTGGCTGGTGGAAGAGGCCAGGCAGTACCGCGAGGCCAACGGG CTGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCGCAGGAACATCGGGCGGCGCAGGCAGGACGCGCCGCCCCGGGACCGGGCCGATCCGCCGGGTCCCGCGGAGCCGCGGCGGCGATACCGCCGGGCAT CCTCCACGACGGCCAGGATGGCGGCCGCGGAGCACCACACCAGGAGTTCACATGAATTTCCACACCCGCAAGTGGGTCAAGCCAGAAGATCTCAACCCCA ACGGCACCCTGTTCGGCGGCAGCCTGCTGCGCTGGATCGATGAAGAAGCGGCGATCTACGCGATCATCCAGCTGGGCAACCAGCGCGTGGTCACCAAGTA CATTTCCGAGATCAACTTCGTCAGCTCGGCGCGCCAGGGCGACATCATCGAGCTGGGCATCACCGCCACCGACTTCGGTCGTACCTCGCTGACCATGACC TGCCACGTGCGCAACAAGATCACCCGCAAGAGCATCCTCACCATCGACAAGATGGTCTTCGTCAACCTCGGCCCGGACGGCCTGCCGGCGCCCCACGGCA
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MRRKIPSTAALVSFESAARHESFTKAAEELSLTQSAICRQIATLEEFLGVELFRRSRRGVKLTEAGLSYSRRVAVRLDAVERDTLAVMGHQGGGAIELAV VPTFGTQWLLPRLKRFQRLHPEVTINLTNRTRPFLFADTEFDAALYFGDADWSGTVSHFLMRENPVPVCSPELLGGRRTLSAEQVAGLPLMQQSTRPYAW RQWFHSQGLNVAHDMSGPRYELFSMLAQAAMHGMGVALIPPFLIQDKLADGRLIVPMQHAYLSENAYYLIIPERRVESAMLNAFRDWLVEEARQYREANG LG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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