Strain | Pseudomonas aeruginosa BWH050 adTzs-supercont1.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACGGGCCCGGCCTGCGACCGACCCCGGACCGGGTCCGCGAGACCCTGTTCAACTGGCTGGCACCCTATGTCGAAGGCGCACGGGTGCTCGATCCCTTCG CCGGCAGCGGCGCGCTGTTCCTCGAGGCGTTGTCGCGCGGCGCCCGCGAAGGGCTGGCCCTGGATACCAACGGCGAAGCGGTGGCGGCCCTGCGCAACCA CCTCGACGCGCTCAAGTGCGGCACCGCCCAACTGGTCCTCGGCGATGCCGTGCGCTACCTGGGAAACCAGGCTCCGAGCGCCTTCGACCTGGTGTTCCTC GACCCGCCGTTCCATCAGAACCTGCTGCAGGACGCCTGCCGCCTGCTCGAAACCCGCGGCTGGCTGAACCCCGACGCCTGGATCTATACCGAGAGCGAGA GCGTCCCCTCGTCCCTCGGCCTGCCCGGAAACTGGCGGCTGCACCGGGAAAAGAAAGCCGGCAACGTACATTACGCGCTCTGGCAGCGGGGAGCCTGAGG
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DNA Sequence for Gene |
>V551_03817
ATGAGCCCGGCTTCCGCGAGCATTCGCCAACGCCTGCTGGCGCTTGGCGAGCCTTGCGCGGCGCAACCCGCCGCCGACTGGCAGGGCGATATCGCCCTGC CCGCCGAGCTGGAGCGTTTCTACCGCGAGGTCGGCCCGCTCGACTGCACCCTGGAGAGTGCCGGCAACCCATTTTTCCTGCCGTCCCTGGCCCGCCTCTG GCAGCGCCAGGCCGGCTATCGCTGGCACGGCATCAGCGGCGAGCGCCTGTCGGGCTGGCAGGACGACTGGCTGGTGGTGGCCGACCAGGGCGCCGACCCG TTCATCCTCGAGACCGGCAGCGGGCGCATACTCTTCGACCTGCATGGCGGCAGGGGCTGGGACCCGGCCCCGTGCTTCGACGACCTGTGGCAGATGGCGG CCAGCCTGGCCTGCTTCGGCGAGGTCTGGAGCGGCGCCGGCGAGGACATCCTGCTGGACGACTGCAGCGTCGCGCCCCGCTATCGGCAGCAGCTCGTCGA CGAACTGCAACCGATCCTCGGTTCGCGCCAGCGGGCGGAGGACCTCGCCGACGAGTTCGGCTGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTGGTGACCACACCACCACCGCCCATGACCTGCGCATGACCGCGTCCCCGACCTTCCAGCCCGCCTGGTGGCTGCCCAATCCGCACCTGCAGACCCTGT GGAGCCCGTTTTTCCGCCGCGGGCCGACCCTGGAACGGCAGCGCGAACGCCTGTGGCTGGCCGATGGCGACTTCATCGACCTCGACTGGGCCGGCCCGCA CGATGCCGAAACCCCGCTGGTGCTGGCACTGCACGGCCTCACCGGGTCATCCTCGTCGCACTACATCCTCGGTCTGCAGCGCGCCCTGCTGGAGCGCGGC TGGGCCAGCGTGGCGCTGAACTGGCGCGGTTGCTCGGGGGAGCCGAACCGCCTGCCGCGCGGCTACCATTCCGGGGTCAGCGACGACCTCGCCGAGGTGG TCGCGCACCTGCGCGCCAGGCGCCCGCAAGCGCCGCTGTACGCGGTCGGCTATTCGCTGGGCGGCAACGTGCTGCTCAAGTACCTGGGCGAAACCGCTGG
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Amino Acid Sequence |
>hypothetical protein
MSPASASIRQRLLALGEPCAAQPAADWQGDIALPAELERFYREVGPLDCTLESAGNPFFLPSLARLWQRQAGYRWHGISGERLSGWQDDWLVVADQGADP FILETGSGRILFDLHGGRGWDPAPCFDDLWQMAASLACFGEVWSGAGEDILLDDCSVAPRYRQQLVDELQPILGSRQRAEDLADEFGW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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