Pseudomonas aeruginosa BWH050, V551_03107
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH050 adTzs-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCAGGTGCGGCGAGCACGGCCAGCAGGCTCAGGATGAGATAGCGCATGGGGACTCCAGGCGGCCGTCGCCAGGTAAGGAAGGCAAGACGTGACGGCTT GCGCCTCGCAGCGTGAATTCTGCTGAACCCGGCCTGAATCGGGCCTGAACGAAGCCTGAACAATTTCTGAACGAACCGTCAGAAAAACCCGGAATGGCTC AAGAACGGACCTCGGCGAAACGTTCGGAAAACCGAACGCCATGCCCCGAAAATATTCGGAAGAGCGGACGAAAGGCCATTTCGGGGCATTTTCATCCAAA TTTAATTTCTTTTACTTTCAAATAGTTAGTCTAAAAAAAGCCGGATTTCATAAGCTGGCATGCATCCTGCCACTACACTGTTCGGCAAGCACGATACTCT CGTGGCTTCCCCCGCCGGGGAAAACCGCGAAACACCCTGTCCCGGAGAGGCCAGGCGCTCGCGGCTCAATAAAAATCAAAACAAGTCGAGGAAGAAATTC
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| DNA Sequence for Gene |
>V551_03107
ATGCGTATCGCTCCCAGTCTGCTGAGCACCGCCATCGTGGCCGCTCTGTTGTCCGCTCCGGTCGTCGCTGACGAGCTCACCGGCACGCTGAAGAAGATCA AGGACACCGGCACCATCACCCTCGGTCACCGTGACGCTTCGATTCCCTTCTCCTACCTCGGCACCGAGCCGGGCAAGCCGATCGGCTACTCCCACGACCT GCAACTGAAAGTGGTCGAGGCGGTGAAGAAGGAACTCAACCTCCCCGACCTGAAGGTCCGCTATAACCTGGTCACCTCGCAGACCCGCATCCCGCTGGTG CAGAACGGCACCGTGGACATCGAGTGCGGCTCTACCACCAACAACGAAGAGCGCCAGAAGCAGGTCGACTTCTCCGTCGGCATCTTCGAGGTCGGCACCC GCCTGCTGTCGAAGAAGACCGCCAACATCAAGGACTTCGACGACCTCAAGGGCAAGAACGTGGTGACCACCGCCGGCACCACCTCCGAGCGCCTGCTCAA GGCCATGAACGCGGACAAGAAGATGGGCATGAACATCATCTCCGCCAAGGACCACGGCGAGTCCTTCATGATGCTCGAATCCGGCCGCGCGGTGGCCTTC ATGATGGACGACGCGCTGCTCTACGGCGAAATGGCCAAGGCCAAGAAGCCGGACGACTGGGTCGTCGGTGGCACCCCGCAGTCCTTCGAGATCTACGGCT GCATGGTGCGCAAGGGCGACGCGGCGTTCAAGAAAGTGGTCGACAAGGCCATCACCGATACCTACGCCTCCGGCGAGGTCAACAAGATCTACGACAAGTG GTTCACCCAGCCGATCCCGCCGAAGGGCCTGAACCTCAACTTCCCCATGAGCGAAGAGCTGAAGAAGCTGATCGCCAGCCCGACCGACAAGGCCGCCGAG CAGATGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGAGCGCCAGGCGTTCCTCCCGGAGCGCCAGCGCTTCGCGCGTCGCCCCCGCCTCGCGGCGGGGCCTCGGGGACGCGGGAGGGGCCTGCCCCTCCCCAGC CGTCTCCCCCGGAAGAGCAGCGCCGCCGGCCCGCACGGCCGCGCCGGCGCCTGCCTTCCCCGCCAGTGTCTGCAACCGATTGAACCGAGGGGAAACCCCA ACATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGGATCGGCAGCGAAACCTACCTCGACTGGTACATCGCCGGTCTGGGCTGGACCAT CGCCATCGCCCTGGTCGGCTGGATCATCGCCCTGGCGCTGGGCTCGCTGCTCGGCGTCATGCGCACCGTGCCGAACCGCCTGGTATCGGGGATCGCCACC GCCTACGTGGAAATCTTCCGCAACGTGCCGCTGCTGGTGCAGCTGTTCATCTGGTACTTCCTGGTACCCGACCTGCTGCCCGAGGGCCTGCAGACCTGGT
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| Amino Acid Sequence |
>ABC transporter
MRIAPSLLSTAIVAALLSAPVVADELTGTLKKIKDTGTITLGHRDASIPFSYLGTEPGKPIGYSHDLQLKVVEAVKKELNLPDLKVRYNLVTSQTRIPLV QNGTVDIECGSTTNNEERQKQVDFSVGIFEVGTRLLSKKTANIKDFDDLKGKNVVTTAGTTSERLLKAMNADKKMGMNIISAKDHGESFMMLESGRAVAF MMDDALLYGEMAKAKKPDDWVVGGTPQSFEIYGCMVRKGDAAFKKVVDKAITDTYASGEVNKIYDKWFTQPIPPKGLNLNFPMSEELKKLIASPTDKAAE QM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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