Pseudomonas aeruginosa BWH050, V551_02471
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH050 adTzs-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTCGTGGGTCAGCCAGTGCACCCGCGAACAGCCAGCGGCGCCGGCCTCGGCGTAGACATGCTCGATCAGCCGGCGCCCTATGCCTTCGCCGCGCAGGCC CTCGGCGACGAACAGGTCCTGCAGGTAGCAGTAGTCGCCGACGGTCCAGCAGGAGCGGTGGTAGATCCAGTGCACCAGGCCCACGGCGCGCTCGTCGAGC CAGGCGAGGGCGGCGTTCATCGGTTCGTCGGCATCGAGGAAGCGCTGCCAGGTGGCGTCGCTGGTAGCGGCGGCGATCTCGGTCTTGTAGAAGCGCTGGT AGCCCTCCCACAGCGGCAGCCAGGCGGCGTGGTCGGCGGCGCCGACGGGACGAATCTGCAGGGACGTGCTCATGGCTCGGTTCCATGTCCGGGTAAAGGT GCCTCCAGACTAGGCCGGGAAATGGTCCGCTAGAAGATCCATTGCTGGTCAATTCCACAGGTCCAATCCACACTGGCGCTTTCTTCCCTCCGAGACCGCC
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| DNA Sequence for Gene |
>V551_02471
ATGGCCACCGTACTGCCCTTCGACGCCGCCGGCATCCACCTCGACCCCGCCCAGGGCCTGGCGCGCCAGCTCTACGCCGCGCTGCGCGAACGGATCCTCG ACGGCCGCCTCGGCAGCCGCACGCGGATGCCCGCCAGCCGCGAGCTGGCCCAGGCCCTGAAGGTCTCGCGCAACACCGTGGTGCGGGCCTATGAACAGTT GCACGCCGAGGGCTATATCGACGGGCGCACAGGCGACGGCACCTACGTTGCCGAGTTGCAGGAAATCCCAGGCAGGGCCCCTGCCGTCGCCCCGAGCGCT CCCGCGCCACGCGGCCCGGCGGCCCTGGCGCCGCCTCCGGAAGGCGCGCCGCGAGCGTTCCGCGTCGGCGTGCCGGCCTTCGACCTGTTCCCCTTCGACA CCTGGGCGCGGCTACAGGCGCGCTTCTGGCGCAACCCGCCGGCGGACTGCCTGGGCTACGGCGACCCGGCCGGCGAGGCGCGCCTGCGCGAGCTGATCGC CGCCTACCTGCGCAGCGCGCGCGGCCTGCGCTGCGAGGCGGAACAGGTGATCGTCACCCATGGCGCGCAGCAGGCCATCCGCCTGTGCGCCCAGGTGTTG CTCGAGAACGGCGATCCGGTGGCTGTGGAAAACCCCGGCTACCGCGCGGCGCGCCTGGCCTTCGCCGCGACCGGCGCGGTACCGCACGGGATCGACATCG ACGCCGAGGGCCTGCGCAGCGACCGGCTCGCGGGCATCGCCGGCTGCCGCCTGGCCTATGTCACGCCGTCACACCAGTACCCCACCGGCGTCACCCTGTC GCTGGCGCGGCGCCTGGAGCTGCTGGAGTGGGCCGAGCGCGCCGACGGCTGGATCGTCGAGGACGACTACGACGGCGAGTATCGCTACAGCGGTACGCCG CTGGCGCCGCTGGCCGCGCTGGACCGACAGGGCCGGGTGCTCTACGTCGGGACCTTCTGCAAGATCGCCTTCCCGGCGTTGCGCCTGGGCTACCTGGTGG TCCCGCCGGCGCTGGTCGAGCGCTTCCGCCAGCGGCGGGCCATCGAGGTACGCCATTCGGAGGTGGGCACCCAGCGGGTCATGGCCGACTTCATCGCCGA GGGGCATTTCCAGCGCCACGTCCGCCGCATGCGCCGCGCCGCCCGCGCCCGCCGCGACGCCTTGCTGCGGGGCTGGCCAGAGGCGCCGGGTTGCCAGCCG TTGCCGGCGGTGGAGGCGGGGCTGCACCTGTGCGTGCGGGTCGACAGCCTGGCGCGGGAGCGGGCCCTGATCGCCGCGGCGGCAGCCGCCGGGGTGGAAG TCAGCGCCTTGAGCGACTACTGGATGGACGACTCCAGCGTTGCGCCAGACGACCGCGCGGGCCTGGTGCTGGGCTTCGCGGCAGTACCCGAGGCGCGTAT CGACGAGGCGCTGCGGGCGTTGCGCAAGGCCTGGCGGCGGGAGGCCCTGGTTGGACCCGTCGTCGCGACTGACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATGCCCCCGGATCACCCTCGCGCCCAGGAGTAGCCATGAGTGTCGCCCTTTCCGCCGCGCCCGAGCGCAAGCTCGCCGCCCCCCTGATCGCCTTCGCCC TGCTGGTGCTCGGCGGGCTGTTCCTGTTCAACGCGGTCAGCGCGCGCCAGGCCATCCTCTTCATCGTCGGCGGCGCCCTGGGCCTGACCCTCTACCAGGC CGCCTTCGGCTTCACCTCCGCCTGGCGGGTATTCATCCGCGAACGGCGTGGCGCCGGGCTGCGCGCGCAGATGGTGATGCTGGCGCTGGCGGTGCTGCTG TTCTTCCCGGCGCTGGCGGCGGGCAGCCTGTTCGGCCAGCCGGTGAGCGGTTTCGTCTCGCCGGTCGGCACTTCGGTGATCGTCGGCGCCTTCATTTTCG GCATCGGCATGCAACTGGGCGGCGGCTGCGCCTCCGGCACCCTGTTCACCGTCGGCGGCGGCAACGCGCGGATGCTGGTGACCCTGCTGTTCTTCATCCT
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MATVLPFDAAGIHLDPAQGLARQLYAALRERILDGRLGSRTRMPASRELAQALKVSRNTVVRAYEQLHAEGYIDGRTGDGTYVAELQEIPGRAPAVAPSA PAPRGPAALAPPPEGAPRAFRVGVPAFDLFPFDTWARLQARFWRNPPADCLGYGDPAGEARLRELIAAYLRSARGLRCEAEQVIVTHGAQQAIRLCAQVL LENGDPVAVENPGYRAARLAFAATGAVPHGIDIDAEGLRSDRLAGIAGCRLAYVTPSHQYPTGVTLSLARRLELLEWAERADGWIVEDDYDGEYRYSGTP LAPLAALDRQGRVLYVGTFCKIAFPALRLGYLVVPPALVERFRQRRAIEVRHSEVGTQRVMADFIAEGHFQRHVRRMRRAARARRDALLRGWPEAPGCQP LPAVEAGLHLCVRVDSLARERALIAAAAAAGVEVSALSDYWMDDSSVAPDDRAGLVLGFAAVPEARIDEALRALRKAWRREALVGPVVATD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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