Pseudomonas aeruginosa BWH050, V551_00939 (fadH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH050 adTzs-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATGCTCGGGGAACACCACCACCGTGCGCTCGTTGAGCAGGCCCTGGCGGCGGGCATTTTCCAGGTAGGCGTGGAATTTCAGCTGCAACCGTTCGGCGCT CTGGTAGTCCGGCGTGAACAGTTCCGGCTGGACCGCCAGCAGGTTGCCGCGCTCGCCGGGCTGGCCCTGGACCACGCTGACCTGGCTGCGCAGGTCGGAC AGGTAGTGGCCTACCGGGCGGCGTTCGGCCCAGCCGGCGTAGGCGGCGAAGAGGGTGATGAGGATCAGGAAGATCAGCTTGCGCATGCGGGTCTCCAAGG CAGCCCACAGGGTAGGGGAGTGGCGTCGGCTTGCCAAGCATCCCTGTGCATTCCGATCAGTAACTTGTCATTTAGGATCATTGAGCGCTCCGGTGGCGCT CCTTAGAGTCGTCGCCATACCGACCGCTGCCCGTGCCGCGCATTGCGCCCGAGGCCGCGGCATATCCGTGAACGCGTTTCGCCCGATGTGGAGACCCCCG
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| DNA Sequence for Gene |
>V551_00939
|fadH
ATGACCGCCGCCGTTCCCTATCCGCACCTGCTCGCCCCGCTGGACCTCGGCTTCACCACCCTGCGCAACCGCACCCTGATGGGGTCCATGCACACTGGCC TGGAAGAGAAGCCGCAGGGCTTCGAGCGCATGGCGGCGTATTTCGCCGAACGCGCCCGTGGCGGCGTCGGCCTGATGGTCACCGGCGGCATCGGCCCGAA CGAAGAGGGCGGCGTGTATTCCGGCGCGGCCAAGCTGAGCACGCCGGAAGAGGCGGAGAAGCACAGGATCGTGACCCAGGCGGTGCACGAGGCGGGCGGC AAGATCTGCATGCAGATCCTGCATGCCGGCCGCTACGCCTACAGCCCGAAGCAGGTGGCGCCGAGCGCGATCCAGGCGCCGATCAATCCGTTCAAGCCCA AGGAACTCGACGAGGAAGGCATCGAGAAGCAGATCGCCGACTTCGTCAACTGCGCCAGCCTGGCCCAGGTCGCCGGCTACGATGGCGTCGAGATCATGGG GTCGGAAGGCTACTTCATCAACCAGTTCCTCGTGCAGCACACCAACCAGCGCACCGACCGCTGGGGCGGCAGCTACGAGAACCGCATGCGCCTGCCGGTG GAGATCGTCCGCCGGGTGCGCGAGGCGGTGGGGCCGAACTTCATCATCATCTATCGCCTGTCCATGCTCGACCTGGTCGAGGGCGGCAGCAGTTGGGACG AGATCGTGCTGCTGGCCAAGGCCGTCGAGAAGGCCGGCGCGACCCTGATCAACACCGGTATCGGCTGGCACGAGGCGCGCATCCCGACCATCGCCACCAA GGTACCGCGCGCGGCCTTCACCAAGGTCACCGCCAAGTTGCGCGGCGAGGTCGGCATCCCGCTGATCACCACCAACCGCATCAACACCCCCGAGGTGGCG GAGAAGGTCCTGGCCGAGGGCGATGCCGACATGGTCTCCATGGCCCGGCCGTTCCTCGCCGACCCGGATTTCGTCAACAAGGCCGCCGCCGGCCACGCCG AACGGATCAACACCTGCATCGGCTGCAACCAGGCCTGCCTCGACCACACCTTCGGCGGCAAGCTGACCAGTTGCCTGGTCAACCCGCGCGCCTGCCACGA AACAGAGCTGAACTACATTCCCACCGCCAGGCCGAAGAAGATCGCCGTGGTCGGCGCCGGCCCGGCCGGCCTGGCCGCCGCCACCGTGGCCGCCGAGCGT GGGCACCGGGTCAGCCTGTTCGACGCCGCCGGCGAGATCGGCGGGCAGTTCAACGTGGCCAAGCGGGTTCCCGGCAAGGAAGAGTTCCACGAGACCCTGC GCTACTTCCGCAACAAGCTGGAGAGCACCGGCGTCGAGCTGCACCTGAACCGCCGGGTCGGCGTGGACGATCTGGTCGCGGGCGGCTACGACGAGATCGT CCTCGCCACCGGCATCGTCCCGCGCACGCCGGCGATCCCCGGCATCGAGCATCCGAAGGTGATCAGCTACCTGGATGCGATCCTCGAGCGCAAGCCGGTG GGCGGCAAGGTGGCGGTGATCGGCGCCGGCGGCATCGGCTTCGACGTCTCCGAATTCATCACCCATGCCGGTCCGTCCACCAGCCTGGAGCGCGAAGCGT TCTGGAAGCAGTGGGGGATCGATACCCGCCTGGAGGCCCGCGGCGGCATCGCCGGGGTCAAGGCCGAGGTGCATCCGGCAGCGCGCCAGGTGTTCCTCCT GCAACGCAAGAAGAGCAAGGTCGGCGACGGCCTCGGCAAGACCACCGGCTGGATCCATCGCGCCGGCCTGAAGAACAAGCAGGTGCAGATGGTGAATGCC GTGGAGTATCTCGGGATCGACGACGCCGGCCTGCATATCCGCGTTGCCGAGGGCGAGCCGCAGGTGCTGCCGGTGGATACCGTGATCGTCTGCGCCGGCC AGGACCCACTGCGCGAGTTGCAGGACGGCCTGCTGGCGGCCGGCCGGAGCGTGCACCTGATCGGCGGCGCCGATGTCGCCGCCGAGCTGGATGCCAAGCG CGCCATCAACCAGGGTTCGCGCCTGGCTGCCGAACTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAACCTGTCCGCGATCTGTTGCGTAGCGGAGAAACTGCGTTGAAAACGGCTTTTCTCCAGCTCGCACAGGTTCTGCGTATCGTCCCTGTCCGCGCTCGTC GGCGCGGCGGGGCGCTGCGCACCGGTTTGGTGAACGGTGGCGCTCTGCCACGGTGATCTCCGTCCGCTCAAAACCCGACCGCTTCACAATTTCCCCTACC GCTCGGCGGGCCGTCCGGCATCGCCCGGGTGTCTGCCAACCCAGTCACATTGCCCGCGACATTTTTTCCCCTAGACTTGCCCGAACAACGAGATAGCGCC TGTTTTTCAGGTGACATGCCAGATGGGTACTGCCGGATGCGGGCCGCCTCGCCAGGCGTTCGAGGGTTAGCGATGAGCATGCAGAAAAAGCCACAGATGG CGGAGGCCGTGCTGTTCTTCAACGACAGCGGCGTCTGCAAGGAAATGCTGTATCCCGAATTCGAGGCGCTGCTCGATGGCCTGGTGCGCATGCCGGAATA
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| Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MTAAVPYPHLLAPLDLGFTTLRNRTLMGSMHTGLEEKPQGFERMAAYFAERARGGVGLMVTGGIGPNEEGGVYSGAAKLSTPEEAEKHRIVTQAVHEAGG KICMQILHAGRYAYSPKQVAPSAIQAPINPFKPKELDEEGIEKQIADFVNCASLAQVAGYDGVEIMGSEGYFINQFLVQHTNQRTDRWGGSYENRMRLPV EIVRRVREAVGPNFIIIYRLSMLDLVEGGSSWDEIVLLAKAVEKAGATLINTGIGWHEARIPTIATKVPRAAFTKVTAKLRGEVGIPLITTNRINTPEVA EKVLAEGDADMVSMARPFLADPDFVNKAAAGHAERINTCIGCNQACLDHTFGGKLTSCLVNPRACHETELNYIPTARPKKIAVVGAGPAGLAAATVAAER GHRVSLFDAAGEIGGQFNVAKRVPGKEEFHETLRYFRNKLESTGVELHLNRRVGVDDLVAGGYDEIVLATGIVPRTPAIPGIEHPKVISYLDAILERKPV GGKVAVIGAGGIGFDVSEFITHAGPSTSLEREAFWKQWGIDTRLEARGGIAGVKAEVHPAARQVFLLQRKKSKVGDGLGKTTGWIHRAGLKNKQVQMVNA VEYLGIDDAGLHIRVAEGEPQVLPVDTVIVCAGQDPLRELQDGLLAAGRSVHLIGGADVAAELDAKRAINQGSRLAAEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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