Pseudomonas aeruginosa BWH049, V550_05955
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH049 adTyP-supercont1.9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGAAAAGGTAGAGGTCTACAGCTACGAGCTGCTGGCCTACCGGACTCTGGTCAACGCCCAGGCCCTGCCGGACAGCGACGACCCGGCGCGACGCCTG CCGGACTACTTCATCACCGCCGACAGCGTCACCCCGGCGCAGCACGTGGACATCCAGGCGGCGGCGCAGAAGTGGGTCGATTCGTCGATCTCCAAGACCG CCAACGTGCCCACCGACTACCCGTTCGAGGACTTCAAGGACATCTATCGCTACGCCTGGCACCAGGGACTCAAGGGCTGCACCACCTTCCGCTTCAATCC CGAGGCGTTCCAGGGCGTGCTGGTCAAGGAGTCCGACCTGGAGAAGACCCGCTACCGCTTCGAACTGGAGGACGGCAGCGTGGTGGAGTTCAAGGGCAAC GAGCAGGTCGAGTACGACGGTGAGATCCATACCGCCGCCAACCTCTTCGACGCCTTGAAAGAAGGCTATTACGGCAAGTACTGAGGCCGGGGGAATCGAT
|
|
| DNA Sequence for Gene |
>V550_05955
ATGTCAGCAGTCAAGATCACGCAGAAGATCAAGGGCTTCAAGGTCGTCAACGAAGCCGAGGAGCAGGCCCTTGCCGCCGCCGCGGAAGCCGCGTCGGTGG TGCAGATGGACGAGACCCTGGAGCGCCCGGATACCCTGATCGGCGCCACCTACAAGATCAAGTCGCCGCTGTTCGAGCACGCGCTCTACGTGACCATCAA CGACATGGTCCTCAATGCGGGCACGGCGCACGAGCAGCGGCGTCCCTTCGAGATCTTCATCAACTCGAAGAACATGGATCATTTCCAGTGGATCGTCGCA CTTACCCGCATCATGTCCGCGGTTTTCCGCAAGGGCGGCGACTGCACCTTCCTTGTCGAGGAACTCAAGGCGGTATTCGACCCGCGCGGGGGCTACCTGA AGAAAGGCGGCATCTACATGCCCTCCATCGTCGCCGAGATCGGCGGCGTGCTGGAGCGCCACCTGACGGCCATCGGTCTGTTGCGTGGCCCTGAACTGGA CGAGGAACAGCGTCTTTTCCTCGCGGAAAAACGCGCCGCCTACGAGGCCGCCCAGGGCACCAGCAAGGTCGAGCCGGGCGAAGGCTTCCCCGCCGGCGCG CAACTGTGCGGCAAGTGCAACAGCATGGCGGTGGTACAGATGGACGGCTGCGCCACCTGCCTCAACTGCGGACACTCGAAATGTGGGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCACTTGAAAAACGCATGCGTTTTTCAATGCGAACGACCGGCCAGGATGGCCGGGCTGGGGGTGGGCTGAACGACGAAGCCTCGACAGGATGTCAGCTCG GCCTTACCCAAGACGCCGAACCGCATGCGTTTTGAAGGGCGAACGACCGGCCAGGATGGCCGGGCCGGGGGTGGGCTGAACGACGAGGCCTCGACAGGAT GTCAGCTCGGCCTTACCCAAGACGCCGAACCGCATGCGTTTTGAAGGGCGAGCGGCCGCAGGACGGCCGTACTCCTGCGGTTCCTGCCTATAACGCAAAC GGCAAATGAATCTCCACGTTCTGCCGTTGCGCCAGGCGCATCTCGAACTCCGCCGGATCATGGATCAGCACGTCCTGTCCGGCGAACGCCTCGGCGGCGA TCAGTCGCGACAGCCAGAAGCGCACGCAGGCAACCCGCAGCATGCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
|
|
| Amino Acid Sequence |
>NrdJb
MSAVKITQKIKGFKVVNEAEEQALAAAAEAASVVQMDETLERPDTLIGATYKIKSPLFEHALYVTINDMVLNAGTAHEQRRPFEIFINSKNMDHFQWIVA LTRIMSAVFRKGGDCTFLVEELKAVFDPRGGYLKKGGIYMPSIVAEIGGVLERHLTAIGLLRGPELDEEQRLFLAEKRAAYEAAQGTSKVEPGEGFPAGA QLCGKCNSMAVVQMDGCATCLNCGHSKCG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|