Pseudomonas aeruginosa BWH049, V550_05942
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH049 adTyP-supercont1.9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGCGACCAACCGCGACCTGGGCGCGATGGTCGCCCAGGGCCAGTTCCGCGAGGACCTGCTCTACCGCCTCAACGTGATCGTGCTCAACCTGCCTCCCC TGCGCGAACGCGCCGAGGATATCCTCGGCCTGGCCGAACGTTTCCTCGCCCGCTTCGTCAAGGACTACGGCCGCCCCGCCCGCGGCTTCAGCGAAGCCGC CCGCGAGGCCATGCGGCAATACCCCTGGCCGGGCAACGTACGCGAGCTACGCAACGTGATCGAACGCGCCAGCATCATCTGCAACCAGGAACGGGTGGAT GTCGACCACCTCGGTTTCAGCGCTACGCAATCCGCCAGCAGCGCGCCGCGGATCGGCGAATCGCTGAGCCTGGAAGACCTGGAGAAAGCCCATATCACGG CGGTGATGGCCTCCAGCGCGACCCTCGACCAGGCCGCCAAGACCCTCGGTATCGATGCCTCGACCCTGTACCGGAAGCGCAAGCAGTACGGCCTATGAGC
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| DNA Sequence for Gene |
>V550_05942
ATGCCGCTGCCGATGAAGCTCCGGACCCGGTTGTTCCTCAGCATTTCCGCGCTGATCACCGTCTCGCTGTTCGGCCTGTTGCTCGGGTTGTTCAGCGTGA TGCAGCTCGGCCGCGCTCAGGAGCAACGGATGTCGCACCACCACGCGACCATCGAGGTGAGCCAGCAGTTGCGCCAGCTGCTCGGCGACCAGTTGGTCAT ACTGCTCCGCGAAAAACCCGACGGGCAGGCCCTGGAGCGCTCGCAGAACGATTTCCGACGGGTCCTGGAACAGGGTCGGGCGAATACCGTCGACGGCGCC GAGCAGGCCGCCCTGGATGGCGTTCGCGACGCCTACCTGCAACTGCAGGCGCACACCCCGGCCCTGCTCGAGGCGCCCATGGCCGACAACGACGGCTTCA GCGAAGCCTTCAATGGCCTGCGCCTGCGTTTGCAGGACCTGCAGCAACTGGCGCTGGCCGGCATCAGCGAAGCCGAGACCAGCGCCCGCCATCGTGCCTA CCTGGTCGCCGGCCTGCTTGGCCTGGTGGGCGTCGCCATCCTGCTGATCGGTTTCGTCACCGCCCACAGCATCGCCCGGCGCTTCGGCGCACCGATCGAA ACCCTGGCGCGGGCGGCGGACAGGATCGGCGAAGGCGATTTCGACGTGACCCTGCCGATGACCAACGTCGCCGAGGTCGGCCAGTTGACCCGGCGTTTCG GCCTGATGGCCGAGGCCCTGCGGCAGTACCGCAAGACCAGCGTCGAAGAGGTGCTTTCCGGCGAGCGGCGCCTGCAGGCGGTACTCGACAGCATCGACGA CGGCCTGGTGATCTTCGACAACCAGGGGCGCATCGAACACGCCAACCCGGTCGCGATCCGCCAGCTGTTCGTCTCCAACGACCCCCATGGCAAGCGGATC GACGAAATACTCAGCGATGTCGATGTCCAGGAAGCGGTGGAAAAGGCCCTGCTCGGCGAAGTCCAGGACGAGGCGATGCCCGACCTGGTGGTGGACGTCG CCGGCGAGTCGCGCCTGCTGGCCTGGTCGCTGTATCCGGTCACCCATCCCGGCGGGCATAGCGTCGGCGCGGTGCTGGTGGTCCGCGACGTGACCGAGCA GCGCGCCTTCGAACGGGTCCGCAGCGAATTCGTCCTGCGCGCCTCCCACGAACTGCGCACGCCGGTGACCGGCATGCAGATGGCCTTCAGCCTGCTCCGC GAACGCCTGGACTTCCCCGCGGAGTCGCGGGAAGCGGACCTGATCCAGACGGTGGACGAAGAGATGTCGCGGCTGGTCCTGCTGATCAACGACCTGTTGA ACTTCTCGCGCTACCAGACCGGCATGCAGAAGCTCGAACTGGCGTCCTGCGACCTCGTCGACCTGCTCACCCAGGCGCAGCAGCGTTTCACTCCCAAGGG CGAGGCCCGCCGGGTCTCGCTGCAACTGGAGCTGGGCGATGAACTGCCGCGCCTGCAGCTCGATCGCCTGCAGATCGAGCGGGTGATCGACAACCTGCTG GAAAACGCCCTGCGCCATAGCAGCGAAGGCGGGCAGATCCACCTGCAGGCCCGGCGCCAGGGCGACCGGGTGCTGATCGCGGTGGAAGACAATGGCGAAG GCATTCCCTTCAGCCAGCAAGGACGGATCTTCGAGCCTTTCGTCCAGGTCGGACGCAAGAAGGGCGGCGCCGGCCTCGGCCTGGCGCTGTGCAAGGAAAT CATCCAGCTGCATGGCGGGCGCATCGCGGTGCGCTCGCAACCGGGCCAAGGCGCGCGCTTCTACATGCTGCTGCCGGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGGGCCGCTCCCGGCAGGCTTTCCACAGGCCTCAGGAAGTCGGCACCGCCAGCAGCAGGGCGGCGGTTTCCAGGTCCGGCTCGCCATCGAAGCGGGCC GGACGGTATTTCATCTGGAAAGCGCCGATGACGTCGCGGGTGTCCTTCTCCAGCTCGCCGGTCTGCGGCACCAGGTAACCGTGCCGCGCCAACTGCTGCT GGAACCAGCGCACATCCGGCAGCTGGCCGTTCAGTTCGGCGAGCCGGCGCGCCAATTCGCCGGGCTTCGGCCAGGGCACCAGGCCGGCGTCGGCGAGGCG CTTCCAGGGGAACAGCGGACCTGGATCGACCTTGCGGCCCGGCGCGATATCGCTGTGTCCGATGATCCGGTCCGGGGTGATGCCGTGGCGCTTGGCGATG TCCTTCAGCAGGGGGATCAGCGCCTGGATCTGCGCTTCGCTGAACGGATACCAGACCCGCCCCTGGGGTGTATCGCGATAGCCCTGGTTGACGATCTCGA
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| Amino Acid Sequence |
>histidine kinase
MPLPMKLRTRLFLSISALITVSLFGLLLGLFSVMQLGRAQEQRMSHHHATIEVSQQLRQLLGDQLVILLREKPDGQALERSQNDFRRVLEQGRANTVDGA EQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGISEAETSARHRAYLVAGLLGLVGVAILLIGFVTAHSIARRFGAPIE TLARAADRIGEGDFDVTLPMTNVAEVGQLTRRFGLMAEALRQYRKTSVEEVLSGERRLQAVLDSIDDGLVIFDNQGRIEHANPVAIRQLFVSNDPHGKRI DEILSDVDVQEAVEKALLGEVQDEAMPDLVVDVAGESRLLAWSLYPVTHPGGHSVGAVLVVRDVTEQRAFERVRSEFVLRASHELRTPVTGMQMAFSLLR ERLDFPAESREADLIQTVDEEMSRLVLLINDLLNFSRYQTGMQKLELASCDLVDLLTQAQQRFTPKGEARRVSLQLELGDELPRLQLDRLQIERVIDNLL ENALRHSSEGGQIHLQARRQGDRVLIAVEDNGEGIPFSQQGRIFEPFVQVGRKKGGAGLGLALCKEIIQLHGGRIAVRSQPGQGARFYMLLPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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