Pseudomonas aeruginosa BWH049, V550_05555
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH049 adTyP-supercont1.7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCGCCAGCATCACCTTCTTCATCCTTACCGTGCGTCGCCGCTGGCTGCTCCAGGAACTGCGCGCCGTCGAACGTGCGCGGGAGGCCGGCTGATGCGCT TCCTCGAACACGACGAGGCGGACGACCCGATCCTCTCGATGGTCAACCTGATCGACCTGTTCCTGGTGGTGATCGGCATCCTCCTGATCGTCATCGTGCA GAACCCGCTCAACCCGTTCAGCCAGGACAAGGTGGTGGTGGTCGAGAATCCCGGCGAGGCGGACATGCGCATGCTGGTCAAGGAAGGCAAGGAGCTGAAG CGCTACCAGGCCAGCGGCGAGATCGGCGAAGGGCAGGGCAGCCGCGCCGGGGTGACCTACCGCTTGGCCGACGGACGGATGATCTACGTGCCGGAGAGCG GCGGGGAGGCCGGCAAGTAGCGACGCGTACGGCGGAGAGCTGGGACTTTTGCCCGGAGTTCCCGGATAATGGCCGGTTTCCGTTTCTCTTGGTGCTCGCC
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| DNA Sequence for Gene |
>V550_05555
GTGGAAGTAAAGGTCAATTTTCTCGATAACCTTCGACTGGAAGCCAGGTTCGATGATTTCACGGTGATCGCCGACCAGCCGATTCGCTACAAGGGCGACG GCTCCGCGCCGGGGCCGTTCGACTACTTCCTGGCGTCGTCGGCGCTGTGTGCCGCCTACTTCGTCAAGCTGTACTGCCAGACGCGCAACATCCCCACCGA TAACATACGTCTGTCGCAGAACAACATCGTCGACCCGGAGAACCGCTACCGGCAGATCTTCAAGATCCAGGTGGAACTGCCGGCCGACATCTCGGAGAAG GACCGCCAGGGCATCCTCCGCTCCATCGACCGCTGCACGGTGAAGAAGGTGGTGCAGACCGGGCCCGAGTTCGTCATCGAGGAGGTCGACAACCTCGATG CCGACGCCCAGGCGCTGCTGATGCCCGGCACCGATGCCGCCGGCTGCACGCGCATCCCGGGCAAGGACCTGCCGCTGGAGCAGACCATCGCCAACCTGTC GGCCATCCTCGCCGGCCTCGGCATGAAGATCGAGATCGCCTCCTGGCGCAACATCGTGCCCAACGTCTGGTCGCTGCACATCCGCGATGCGCAGTCGCCG ATGTGCTTCACCAACGGCAAGGGCGCGAGCAAGGAAAGCGCGCTGGCCTCGGCGCTGGGCGAATTCATCGAGCGGCTGAACTGCAACTTCTTCTACAACG ACCAGTACTGGGGAGAAGAGATCGCCAATGCGGCGTTCGTCCATTACCCGGACGAACGCTGGTTCAAGCCCGGCCGCGACGATGCGCTGCCGCTGGGACT GCTCGACGGCCATTGCCTGGCGATCTACGACCCCGACGGCGAGCTGCGCGGCTCGCACCTGTACGACACCAACTCGGGCAATGTGCAGCGCGGTATCTGC GCCTTGCCCTTCGTGCGCCAGTCCGACGGCCAGGTGGTGTATTTCCCCTCCAACCTGATCGAGAACCTCTACCTCAGCAACGGCATGAGCGCCGGTAATA CCCTGGCCGAAGCGCAGGTGCAGTGCCTGTCGGAGATCTTCGAGCGTGCGGTCAAGCGGCAAATCCTCGAAGGCGAACTGGCGCTGCCGGACGTGCCGCC GGAGGTGCTGGCCAAGTACCCGGGCATCCTCGCCGGGATCCGCGGCCTGGAAGAGCAGGGCTTCCCGGTACTGGTCAAGGACGCCTCGCTGGGCGGCGAA TTCCCGGTGATGTGCGTGACCCTGATGAATCCGCGCACCGGCGGCGTGTTCGCTTCCTTCGGCGCCCACCCGAGCTTCGAGGTGGCCCTGGAGCGCAGCC TGACCGAACTGCTCCAGGGGCGCAGCTTCGAAGGCCTGAACGACCTGCCCCAGCCGACCTTCGAAAGCCATGCGCTGACCGAGCCGAACAACTTCGTCGA GCATTTCATCGATTCCAGCGGCGTGGTGTCCTGGCGCTTCTTCAGCGCCAAGGCCGATTTCCCGTTCGTCGAGTGGGACTTCACCCGGCAGGGCGAGGCT GCCAACGCCGAGGAAGCCGCGACCCTGTTCGGCATCCTCGAAGCCATGGGCAAGCAGGTCTACATGGCGGTGTACGAGCACCTCGGCGCTACGGCCTGCC GGATCCTGGTGCCGGGCTACTCGGAAATCTATCCGGTGGAAGACCTGATCTGGGACAACACCAACAAGGCCCTGGCGTTCCGCGAGGACATCCTCAACCT GCACCGCCTCGACGACGCAGCGCTCGGGGCGTTGCTGGAGCGCCTGGAAGACTGCGAGGTGGACGACTACACCGACATCACCACGCTGATCGGCGTCGAG TTCGACGACAACACGGTCTGGGGCCAACTGACCATCCTCGAGCTGAAAGTGCTCATCGGCCTCGCCCTGAAGCGCTTCGAAGACGCCAAGGAAGGCGTGG AGGCGTTCCTCCAGTACAACGACAACAGCGTCGAGCGCGGCCTGTTCTACCAGGCGCTGAACGTGGTGCTGGAGGTCGTCCTCGACGACGAGCTGGAGAT CGCCGACTACGAGGCCAATTTTCGCCGCATGTTCGGCGACGCGCGGATGGACGCCGCGCTGGGCTCGGTGGACGGCAGCGTGCGCTTCTTCGGCCTGACG CCGACCAGCATGAAGCTGGAAGGGCTCGACCGGCACCTGCGGCTGATCGACAGCTACAAGAAACTGCACGCGGCGCGAGCCAGGATGCAGCCCGTGGTGG GCGGCGAGGCCGGCGCTGCCGCGGCTGGCGGTCTCAAGCCTCGGCGCATGGCGATCCGCAAGCGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGGGCGCCGAGGTCAGGGCGCGAGGATGATCATGAGGGAAACTTGATTTCATCACGAAGAAATTGAGTTTGTCTCATGGCATGAGCCTCACGAGAATC CCTCCATCGACCTTTCGACTGGAGGAACACCCATGGCCCTGGCCCACACTCTCGGCTTCCCACGCATCGGACGCGATCGCGAACTGAAAAAAGCCCAGGA AGCGTTCTGGAAGGGCGAGCTGGACGAGGCCGGCCTGCGGGCCGTCGGTCGGCAGCTGCGCGCCGCCCACTGGCAGGTACAGAAGGACGCCGGCATCCAG TTGCTGCCGGTCGGCGATTTCGCCTGGTATGACCAGGTGCTGACCCATTCGCTGACCTTCGGCGTGATCCCCGAGCGCTTCCGGACGCACGGCGAGGCCG GGCCGACCCTGCATACCCTGTTCGGCATGGCCCGTGGCGTCAGCGACGACAGTTGTTGCGGCGGTGCCCATGCCCAGGAAATGACCAAGTGGTTCGACAC
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| Amino Acid Sequence |
>protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
MEVKVNFLDNLRLEARFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQTRNIPTDNIRLSQNNIVDPENRYRQIFKIQVELPADISEK DRQGILRSIDRCTVKKVVQTGPEFVIEEVDNLDADAQALLMPGTDAAGCTRIPGKDLPLEQTIANLSAILAGLGMKIEIASWRNIVPNVWSLHIRDAQSP MCFTNGKGASKESALASALGEFIERLNCNFFYNDQYWGEEIANAAFVHYPDERWFKPGRDDALPLGLLDGHCLAIYDPDGELRGSHLYDTNSGNVQRGIC ALPFVRQSDGQVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKRQILEGELALPDVPPEVLAKYPGILAGIRGLEEQGFPVLVKDASLGGE FPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFSAKADFPFVEWDFTRQGEA ANAEEAATLFGILEAMGKQVYMAVYEHLGATACRILVPGYSEIYPVEDLIWDNTNKALAFREDILNLHRLDDAALGALLERLEDCEVDDYTDITTLIGVE FDDNTVWGQLTILELKVLIGLALKRFEDAKEGVEAFLQYNDNSVERGLFYQALNVVLEVVLDDELEIADYEANFRRMFGDARMDAALGSVDGSVRFFGLT PTSMKLEGLDRHLRLIDSYKKLHAARARMQPVVGGEAGAAAAGGLKPRRMAIRKRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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