Pseudomonas aeruginosa BWH049, V550_04824
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00015 | Methyl-accepting chemotaxis protein (MCP) signalling domain | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 130 | 310 | 4.9E-41 |
| Gene3D | G3DSA:1.10.287.950 | - | - | - | 62 | 353 | 8.1E-56 |
| PANTHER | PTHR32089 | METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB | - | - | 13 | 345 | 3.1E-82 |
| Coils | Coil | Coil | - | - | 153 | 173 | - |
| SUPERFAMILY | SSF58104 | Methyl-accepting chemotaxis protein (MCP) signaling domain | - | - | 77 | 347 | 2.35E-56 |
| SMART | SM00283 | MA_2 | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 85 | 343 | 3.9E-46 |
| CDD | cd11386 | MCP_signal | - | - | 121 | 294 | 1.14513E-52 |
| Coils | Coil | Coil | - | - | 237 | 257 | - |
| Coils | Coil | Coil | - | - | 94 | 114 | - |
| Coils | Coil | Coil | - | - | 328 | 348 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.