Pseudomonas aeruginosa BWH049, V550_04055
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH049 adTyP-supercont1.4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATAAGCGTGCCGAAAACCCCGCGACGTCACTGGGCAGGCCGGTCTACTGGAGGTAACCGACTGATCTGAAACACTTCATCGACAACGTCGGTGACACGCC GACGGGCAGTCCGGCGTGTCACCGGGGGAAATGCGCGAGCCTGTCGCCCCGGTCAGGAACCAAAGGAGTGCAGGCGAACTTTTTTCATCTCCCCACAACC GCTCGAACACGGCTTTCAAGCGGCTGATTTTGCATGGGAAATCTCGACCTTTTTGAATTCTTGTCAAGCGCGTCAAAATGGTGAGAACCCTCACCATTTT GGTGATATTTATTTTTAATTATTTAAAATCAACAAGTTACAAACTCAAACAACCATTTGAAAATAATCTTGCTCAATCGATGATCAGCATCTAGATTCGA ATCCTGTCAGCGCTGACAGGATTACAGAAGCCCTCGGCGCATGGCGAAAAAACAATTTCAAGAACCGGCAACGACCGGTCAGCCTGCGAGGAAAGACGGC
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| DNA Sequence for Gene |
>V550_04055
ATGTCCCTGTTGATCCGTGGCGCCACCGTGGTTACTCACGAAGAGAGTTATCGAGCCGACGTGCTCTGTGCCAACGGCCTCATCCAGGCCATCGGCGAGA ACCTCGACCCCCCCTCCGGCTGCGACGTCCTCGACGGCGGTGGCCAGTACCTGATGCCGGGCGGCATCGACCCCCATACCCACATGCAGTTGCCCTTCAT GGGCACGGTGGCCAGCGAGGACTTCTTCAGCGGCACCGCGGCCGGGCTGGCCGGAGGGACCACCTCGATCATCGACTTCGTCATCCCCAACCCGCGACAG TCGCTGCTGGAGGCCTTCCACACCTGGCGCGGCTGGGCGCAGAAATCCGCTGCGGACTACGGCTTCCACGTCGCCATCACCTGGTGGAGCGACGAGGTCG CCCGGGAAATGGGCGAGCTGGTGGCACAGCACGGGGTGAACAGCTTCAAGCACTTCATGGCCTACAAGAACGCCATCATGGCCGCCGACGATACCCTGGT GGCCAGCTTCGAGCGCTGCCTGGAGCTGGGCGCGGTGCCGACGGTGCACGCGGAGAACGGCGAACTGGTCTTCCACCTGCAGCAGAAACTCCTCGCCCAG GGCCTCACCGGCCCCGAGGCGCATCCGCTGTCGCGTCCGCCGCAAGTCGAGGGCGAGGCCGCCAGCCGCGCCATCCGCATCGCCGAGACGCTGGGTACGC CGCTGTACCTGGTGCATATTTCCAGCCGCGAGGCGCTGGACGAGATCGCCTATGCCCGCGCCAAGGGCCAGCCGGTCTACGGCGAGGTGCTGGCCGGGCA CCTGCTGCTCGACGACAGCGTCTACCGCCACCCGGACTGGGCCACCGCGGCCGGCTACGTGATGAGCCCGCCGTTCCGTCCCGTCGAACACCAGGAAGCG CTGTGGCGCGGCCTGCAGTCCGGCAACCTGCATACCACCGCCACCGACCACTGCTGCTTCTGCGCCGAGCAGAAGGCCATGGGCCGCGACGACTTCAGCA AGATTCCCAATGGCACGGCCGGCATCGAGGACCGCATGGCGTTACTGTGGGACGCCGGGGTCAACAGCGGGCGCCTGTCGATGCACGAGTTCGTCGCGCT GACCTCCACCAACACCGCGAAGATCTTCAACCTGTTCCCGCGCAAGGGCGCGATCCGCGTCGGCGCGGATGCCGACCTGGTGCTCTGGGACCCGCAGGGC AGCCGCACCCTCTCGGCCGCCACCCACCACCAGCGGGTCGATTTCAACATCTTCGAAGGTCGCACCGTGCGCGGCATTCCCAGCCACACCATCAGCCAGG GCAAGCTGCTCTGGGCCGCCGGCGACCTGCGCGCCGAACCCGGCGCCGGACGCTACGTGGAGCGCCCGGCCTACCCGTCGGTGTACGAAGTGCTCGGCCG CCGCGCCGAACGCCAGCGCCCGGTCGCCGTCGAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCTTCCCGCAATACCGGACCGGCCCGTAGAGGCCGGACGGTGCCGTATTGCCGTTGACTGCCCCGAGAAGAAACCAGAAGAGAGGCTACAACCGTGATC GATTCCCTGAACCACCTCCCCCGTCCGGACGCCGGCGCGGATACGCTCGCCGAGCGCTTCGCCGACCTCGCGCCGCCGCTCAACGCCCGCCAGGCCGCCC TGGAAAGCGCCCGCTGCCTGTACTGCTACGACGCCCCCTGCGTCAACGCCTGCCCGACCGAGATCGACATCCCCGGGTTCATCCGCAGCATCGCCCAGGA GAATGTCCAGGGCGCGGCGCAGAAGATCCTCTCGGCGAACATCCTCGGCGGCAGCTGCGCCCGCGTCTGCCCCACGGAAATCCTCTGCCAGCGGGCCTGC GTACGCAACAACGCCCAGGAATGCGCACCGGTGCTGATCGGACAGTTGCAACGCTACGCCCTCGACCACGCCGGCTTCGACGAACATCCGTTCAAGCGCT
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| Amino Acid Sequence |
>D-hydantoinase/dihydropyrimidinase
MSLLIRGATVVTHEESYRADVLCANGLIQAIGENLDPPSGCDVLDGGGQYLMPGGIDPHTHMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPRQ SLLEAFHTWRGWAQKSAADYGFHVAITWWSDEVAREMGELVAQHGVNSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVFHLQQKLLAQ GLTGPEAHPLSRPPQVEGEAASRAIRIAETLGTPLYLVHISSREALDEIAYARAKGQPVYGEVLAGHLLLDDSVYRHPDWATAAGYVMSPPFRPVEHQEA LWRGLQSGNLHTTATDHCCFCAEQKAMGRDDFSKIPNGTAGIEDRMALLWDAGVNSGRLSMHEFVALTSTNTAKIFNLFPRKGAIRVGADADLVLWDPQG SRTLSAATHHQRVDFNIFEGRTVRGIPSHTISQGKLLWAAGDLRAEPGAGRYVERPAYPSVYEVLGRRAERQRPVAVER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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