Pseudomonas aeruginosa BWH049, V550_02313

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BWH049 adTyP-supercont1.2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCGTTGCGCCTGGAGCGGCGAATCGCGCCTGCTGCTGTGCATCACCCTGGAAGCCCGGCAGGTCGGCATCCCGACGCTGCACCAGGCCTTGCAGGCGCT GCGCTCGGCGCGCAGCGAAGTGCTCGCCGCATGAGCCGGGTCGGTGCCTGGCACATCGGCATCGAGCGGCTCGACCTGGCGCATGCCGAGCCGTTCGCGC CGCCCCTGCCGGAGCGCCATCTGCTGGCGCCCGACGGCCGGCCGGTGGAGACCCACGTCGCCAGCCTGTATCCCGCGCAGCAGGCGCAACAGCGCCTGTT CGACTACGCCCGGCCCCAGCTGGAGTTCCACGGCCTGCTGCGCCCCGGCGACTTCCGCCGGGCGCTGCGCGATCTCCGCCTGGCCCTCACGCTGCCCGGC CAGCCCGCCCTGCAGGCCGCGGCCTGCCTGCTCGGCGAGCGCGACGAAGACGAGCGACTGCTGCAAATGGCCCTGAACCTGTTGCACAAGGTATGAATCG
DNA Sequence for Gene
>V550_02313
ATGACGTTGAAACCGACGCAACAGCGCCTGTTGCTGATGCTGGGCTGGTTGCACCTGCAATGCGGCCAGCCGCGACGCGCCCAGGTGTTGCTGGAGGCTT TGCTGAGCGTTGCGCCGGAGCGCCGCGACGGGCGCCGCGCCTTGCTCCTGGCGTTGCTCCAGCAAGGCCTCGGCGAGCCCGCCGTGCGCCTGTGCCGGCA GTTGCAGGGGGAGGGCGAGGAGGAGCCCGGTCTGTGGCGTTGCCTGAGCCGTGCCGAACAGCTCGCCGGGCGTCTCGACGCGGCGCGTGCCGCGCACGCC CGGGCGCTGGAGCTGGAGGCGCGGGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGACCTGAGCGGGCTTCTCGGCCGGGTCGGCGAGCGCAAGGACATCCTGCTGGTGGTGTTGCTGCTGGCGGTGGTGTTCATGATGGTGCTGCCGTTGCC ACCGCTGCTGCTGGACATCCTCATCGCCGTCAACATCACCATCTCCGTGGTCCTGTTGATGATGTCGGTGTACATCGGCTCGCCGTTGCAGTTCTCGGTG TTCCCGGCGGTGCTGCTGATCACCACGCTGTTCCGCCTGGCGCTGTCGGTGAGCACCACGCGGATGATCCTGCTGCAGGCCGACGCGGGGCAGATCGTCA ACACCTTCGGCAGCTTCGTGGTCGGCGGCAACCTGGTGGTGGGTATCATCATCTTCCTGATCATCACCATCGTGCAGTTCCTGGTGATCACCAAGGGTGC CGAGCGGGTCGCCGAGGTCAGCGCGCGCTTTTCCCTGGATGCCATGCCGGGCAAGCAGATGAGCATCGACGGCGACATGCGTGCCGGCGTGATCGATGTC
Amino Acid Sequence
>type III secretion protein
MTLKPTQQRLLLMLGWLHLQCGQPRRAQVLLEALLSVAPERRDGRRALLLALLQQGLGEPAVRLCRQLQGEGEEEPGLWRCLSRAEQLAGRLDAARAAHA RALELEARE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site