Pseudomonas aeruginosa BWH049, V550_01145
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWH049 adTyP-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGGTCGCAACCCCAAGACCGGGGAGTCGGTACGCCTCGACGGCAAGTTCGTGCCGCACTTCAAGCCGGGCAAGGAGTTGCGGGATCGGGTCAACGAGCC GGAATAAGGCTGTTTAGAGGCTTGACCTGCTTGGTATGGAGGTATTCATGCGCACGCTTAAAAGAATGCTTGTTGGGCTACTGATAGTGGTTGTGGCCTT GTCGGCAATTATTTTTACTTTGGAAAATCGTGCTCTTATCCAATTTTCCTTCTTGGGGTGGGAGACGCCTGCGATTCCGAGTGCATTGTTATTTTCATTG GTGTTTGTTGCGGGCGGTCTGCTCGGTTGGTTTTTTGGAGTTTTTGCAGGCTTTGCGCATCATAAGTCGTCAAGACAACCTTCCGTGTAGAACTTGTCGG GGATCGTGGTGTCCAATATATCTTGTTGGGCTTTTCCCCTGATAGAGTTTCCGATTGGACTGATGATGGACTGAATGTGAATAAGCAGAATTCTTCTTTG
|
|
| DNA Sequence for Gene |
>V550_01145
ATGACGGCTGATGGTGAGGTTGACCTGGTGAAGCTGGTCAAGGAGCTTTGGGTTAACAAGGTTCTGATTCTTCTGACTACTCTCCTTGCATTAATCGGGT CTTTTACCTATGCGTATCTGAGTAAGCCTGTATATGAATATAGGGTTGCAGTAGTGCCTCCTGCTCTTGGGTCTATCGAAGGTTTCAATGTTGGTAGAAG GGAGAATGGCCTAGATGCATATACTGTTAGAAGTATCTATGCGATCTTTTCGCGCAATCTGCTTTCGGATGAGAATAAAAAAGAGTTCTTCTATAAGATA TACCTTCCCCAGGTGGGTGAGGGAGCGGAAAGCGAAGATGAGCAGGAGGAGTTTTATAAGAAGTTCTCCAAAGAGGTAAAGATTGATCCTGCTAACAAGC CAGATGCAGACCGTTATACGGTAATTGTGGAGGGCACGAAGCGAGAGGTTCTTGCTACATGGGCACAAGCTTTCGTGCGTTTGGCTGCGGATCGGGCCGT GCATGAGGTTATTGATAGTGCAGGTAGAGATTTCCAGGTAAGAAATGCTGCAATGCAGAGCCGCATAACCGTGCTGCAGAATATGGCGAAGGGCCGCCGT GATGATAGAATTGCACGTTTGAAGGAGGCATTGCTGATTGCGGAGTCGCTCAAGATAGATGGCCCGCCATTAATAGAAGGAGCGTCCGAGCAACAACTCT CCTCGATCATGGATGGTGACTTGATGTACATGCGAGGAGCTAAGGCGCTGCGCGCTGAAATCAACAATCTTGAGTCGCGTAGTGTAGATGCTCCATTCAT TCCTGAGTTGAGAACTCTCCAAGAGAAACTATCTTGGAACTCCAGTTTGTCTGTGGATTCTGATGCGGTGGCTGTCTACAAGGAAGACGAGGGACTCTCT TTTTCAAATCAACCCATTAAGCCGAAGAAGATTCTTATAGTTACTATAGGTACTTTGGCAGGATTGATAATTGGAATTCTACTCGCAGTGCTCGCTGGTT TTATAAGGAAGCTTCGTAGCGATGGCTCTCTTCGCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTTTTGATCTAAACCCTGATGCCACTTACTGGCATCAGGGTTTACTTGTTGTAGTTGTTGAATTGTATTAGGGGGTATCGAGTAGAATGTCAATAAGGCG GGGCGTTTTCTACTCCGGTATATCCATGGGCAGCAACTATCTTTTGCCTCTTGCTGCGATTCCTTTTCTCACGAGAACATTGTCAAGCGAAGCGTTTGGC CAATTGGTGATTGCCCAGGCCGTGGCTGTCATTCTATGTCAACTGGTAGACTTTGGATTTATTCTGGCAGGATCAAGAAAGGCTGCCATTATCGATAACA AAGTTGAACTGTCTAGTTTCTTTTCTGTTGTACAGAGTGCTAGATTCTTATTGTTGCTGCTTTCACTTTTAGTGCTGGCCATTTTGGCTGTATCTTCTAT TTTACCAATCCCCTTGCTTGTATTGGTTGCGGCTGCTCTTCCGGCAGTAGTTGGAAATTATCTTCAAGCAGTATGGTTCTTTCAGGGAAGAGCGCTGTTT
|
|
| Amino Acid Sequence |
>O-antigen chain length regulator
MTADGEVDLVKLVKELWVNKVLILLTTLLALIGSFTYAYLSKPVYEYRVAVVPPALGSIEGFNVGRRENGLDAYTVRSIYAIFSRNLLSDENKKEFFYKI YLPQVGEGAESEDEQEEFYKKFSKEVKIDPANKPDADRYTVIVEGTKREVLATWAQAFVRLAADRAVHEVIDSAGRDFQVRNAAMQSRITVLQNMAKGRR DDRIARLKEALLIAESLKIDGPPLIEGASEQQLSSIMDGDLMYMRGAKALRAEINNLESRSVDAPFIPELRTLQEKLSWNSSLSVDSDAVAVYKEDEGLS FSNQPIKPKKILIVTIGTLAGLIIGILLAVLAGFIRKLRSDGSLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|