Pseudomonas aeruginosa JMM, RLJV_27755
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain JMM contig052, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TATCTGCCGGAAATCAAGGACGGCGACAAGCGCATCCTGATGATCGACGGCGAACCGGTGCCCTACTGCCTGGCGCGCATCCCCGCCCAGGGCGAGACCC GCGGCAACCTCGCCGCCGGCGGCCGCGGCGTGGCCCAGCCGCTGAGCGAGCGCGACCGCTGGATCGCCGCCGAGGTCGGCCCGCACCTGCGCGAGCGCGG CCTGCTGTTCGTCGGCCTCGACGTGATCGGCGATTATCTGACGGAAATCAACGTCACCAGCCCGACCTGCATCCGCGAGATCGACCAGGCCTTCGACACC CGCATCGGCGACAAGCTGATGGACGCCATCGCCGCCCAGCTGGCTGCCCGCTGAATTGCGCGGGCGGGCCTCGGTCCGCCCGCCTCGGCCCGGCCGATGC GCCACGGCGAGCGACCGCGTGTCCAAGGCGCGGAGTGCGTCATAGACTTTTCCGCCCCCCATCGGCAGACTTCGCCCCACGCCAGCCACCACGATCCGCA
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| DNA Sequence for Gene |
>RLJV_27755
ATGAACGCCGCCGTCCTCAAGTCCCCCTCCGCCGCTGCCGGCGTCCGCCCGGCGGACCGTTTGGGCTTCACCCTGTTCATCGCAGCCATCCTGCACGTCG CCTTCATCCTCGGGGTGGGCTTCTCCATGCCCGCGCCGAGCCAGATCAGCAAGACCCTGGAAATCACCCTGGCCACCTTCAAGAGCGACAAGGCGCCGGA AAAGGCCGACTACCTCGCGCAGATGAACCAGCAGGGCAGCGGTACCCTGGAGCACAAGGCCGCGCCGAAGACCACCGAGGTCGCGCCGTTCCAGGACAAC CAGGTGAAGAAAGTCGCGCCGCCGGCTACGCCGAAGCAGGCCAGGAGCGAAGAGGCGCCCAAGGCCGCGGTGACCACCACCCGCCAGCGCCAGCAGAAGG CACCGAGCAAGACTCAGGCACAGAAGGCCGAGCAGGTCGCCAAGCCGGCGCCGCATTTCGACTCAACCCAACTGTCGGCGGAAATCGCCAGCCTTGAGGC CGACCTGGCCAAGGAGCAGCAGGCCTACGCCAAGCGCCCGCGCATCCACCGCCTGAGCGCCGCCTCGACCATGCGCGACAAGGGCGCCTGGTACAAGGAA GACTGGCGCAAGAAGATCGAACGCATCGGCAACCTCAACTACCCCGACGAGGCCCGCCGGCAGAAGCTCTACGGCAGCCTGCGGCTGCTGGTGTCGATCA ACCGCGACGGCACCATCTACGAGGTGCAGGTGCTGGAGTCTTCCGGCGAGCCGATCCTCGACCAGGCCGCCCAGCGCATCGTCCGCCTGGCCGCGCCCTA TGCGCCGTTCAGCGGCGACCTGGCCGACATCGACCGGCTGGAGATCATCCGTACCTGGCGCTTCGAACGCGGCGACCGGCTGTCCAGCAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCGGCAAGGCTGGCTTTCTCGCGTCCGAAGCAGGACACTAGCGGCCATGAAACAGAGCAGCCCAACCTACCTCAAGCATCATTTCCTGATCGCCATGC CGCACATGGCCGACCCCAATTTCGCCCAGACCGTGACCTACCTGGTCGAACACAACGAGCAGGGCGCCATGGGCCTGGTGATCAACCGTCCCAGCGGCCT CAACCTGGCGGAAGTCCTCGAACAGCTCAAGCCGGACGCCCTGCCGCCGGCGCGCTGCCAGCACATCGACATCTACAACGGCGGCCCGGTGCAGACCGAC CGCGGCTTCGTCCTCCACCCCAGCGGCCTGAGCTACCAGTCGACCCTGGAACTGGGCGAGCTGGCGATGTCCACCTCGCAGGACGTGCTGTTCGCCATCG CCGCCGGCACCGGCCCGGAAAAGAGCCTGATCAGCCTCGGCTATGCCGGCTGGGAAGCCGGCCAGCTGGAGGCCGAGCTGAGCGACAACGCCTGGCTGAC
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| Amino Acid Sequence |
>cell envelope biogenesis protein TonB
MNAAVLKSPSAAAGVRPADRLGFTLFIAAILHVAFILGVGFSMPAPSQISKTLEITLATFKSDKAPEKADYLAQMNQQGSGTLEHKAAPKTTEVAPFQDN QVKKVAPPATPKQARSEEAPKAAVTTTRQRQQKAPSKTQAQKAEQVAKPAPHFDSTQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKGAWYKE DWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGEPILDQAAQRIVRLAAPYAPFSGDLADIDRLEIIRTWRFERGDRLSSK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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