Pseudomonas aeruginosa JMM, RLJV_23275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain JMM contig044, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCGGCTTCGTCCTGCCCGGCGACTATGTCGACGTGATGCTCTTCGTGCGTGACGAGCGGGACGGCGAATCGACCCCGCTGGCGCAACTGGTGTTGCCC GGCGTCCGGGTACTGACCTACGGCGAGCGGATCGCCGTGGGCAGCGATGGACAGGACCGCTCGAACCAGGAAAAGGACCCGCGTCCGCCGCGTACCGCGG TGCTGGCGGTACCGGAGGACGGCGTGGCGCGGCTGATGCTGGCGAGCCAGGCCGGTTCGCTGCGCCTGGCCATCCGCAGCAAGGACGAAGAACTCTACCG CAGGGAGCAGGAAGGCGCGCTGCTGCAAGCGTCGCTGGGCGCGCCGAGCGCGGCGCTGAGTCTCGACCAACTGCTGGAGCGCCGCAAACCGACGGCGCCG AGCGTGCGCAGCGCGGCTCCGCGCGTGCCGGTGGCCAACGGGGTCACGGTCTACCGTGGCAGCGCCATGACCCATGAAGCGCCTTGAGGGGAGCCGGCAT
DNA Sequence for Gene
>RLJV_23275
ATGCATCGGAGCACCGGGATAGGCGTGTCGCGCTGGCTGGGAGGGCTGCTGGGGGTGGCGTTGGCGCTGCCGGCGCTGGCTTTGCCGCAGGGCTGCATCG AGTTGCTGGCGCAGGCGCCGCGGGTCGACGTCGTCCAGGGACAACAGCGTGACCTGCGCCTGGCGGTGCCGATCGAACGGCTGGCCATCGGCGATCCGAA GATCGCCGACGTACAGTTGCTGGATCGTCGCGGCTTCCTGGTCACCGGCAAGGAACAGGGCTCCACCAGCCTGCTGATCTGGACCGGCTGCAGTCCCGAG CCGTTGCGCAGCCTGGTGGAGGTCGAGGGACGCGGTAGCGTCGATACCCGCGGTGCTCCAGTGTTCACCGCCGGCGCCGCAGAGGAGCTGCCGAACCAGG TGCAGACCGATATCCGCTTCGTCGAGGTCAGCCGCAGCAAGCTGAAGCAGGCCAGCACCTCGTTCGTCCGCCGCGGCGGCAACCTCTGGGTGCTCGGTGC GCCGGGCAGCCTCGGCGACATCAAGGTCAATGCCGACGGCAGCGGCCTGGGCGGCACCTTCGGCACCGGCAGCTCGGGATTCAACCTGATCTTCGGCGGC GGCAAGTGGTTGAGCTTCATGAATGCCCTGGAGGGCAGCGGCTTCGCCTATACCCTGGCGCGCCCGAGCCTGGTGGCGATGAGCGGGCAGAGCGCGTCGT TCCTCGCCGGCGGCGAGTTTCCGATCCCGGTGCCGAACGGCACCAACGACAACGTCACCATCGAATACAAGGAGTTCGGCATCCGCCTGACCCTCACCCC GACGGTGATGAACAACCGCCGCATCGCTCTCAAGGTGGCGCCGGAGGTCAGCGAACTGGACTACAGCGCCGGCATCCAGAGCGGCGGGGTGGCGGTGCCG GCACTGCGCGTCCGGCGCACCGACACCAGCGTGATGCTGGCCGACGGCGAGAGCTTCGTGATCAGCGGGCTGACCAGCAGCAACTCGGTGAGCAACGTCG ACAAGTTTCCCTGGCTGGGCGACATCCCGATCCTCGGTGCGTTCTTCCGCTCGACCAAGCTGGACAAGGACGACCGCGAGCTGCTGATGATCGTCACCCC GCACCTGGTCCAGCCGCTGGCCGCCGACGCACAGTTGCCGGACCTGCCCGGCGAGGGCCTGCGGCACTACGATCCGGGGTTCTCGCGCCTGTACTTCCTC GAGCGCGGCGAGTACGACGGCCAGCAGAACGACACCGGTCTGTCGGATTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGGCGCGCATGAACCAGAACTTCGTGGCGCTGACCCAGCATCCCGGCGAACTCGACTGGTTGCAGAACAGCCTGGCGTCCGCCGGCCAGGTGGTTCCGG CAGGCAGCGCCAGCCTGGAGGAGCTGCTGGCGCTGCTCGACGTCACCGCCGCCGGGGTGCTGTTCATCAGCCTCGGCAAAAGCAACCTGGTGTCCCAGGG CGCGCTGGTCGAGGGATTGGTATCGGCGCGGCCGATGCTCTCGGTGGTGGCCATCGGCGACGGCCTGGACAACCAGTTGGTGCTGGCGGCGATGCGCGCC GGCGCGCGCGACTTCATCACCTACGGCGCCCGCGCCAGCGAGCTGACCGGGCTGATCCGGCGCCTCGGCGGACGCCTGCCCAGCGTGCCGGTGAGCGCGG CGCGCCAGGGCGAGCTGCTGACCCTGGTCAGCGCCCGACCGGACGCCGACGGCGCCTTCGTCGCCTTGCACCTGGCCAAGGCGTTGCAGGAGCAGACGCC
Amino Acid Sequence
>secretin
MHRSTGIGVSRWLGGLLGVALALPALALPQGCIELLAQAPRVDVVQGQQRDLRLAVPIERLAIGDPKIADVQLLDRRGFLVTGKEQGSTSLLIWTGCSPE PLRSLVEVEGRGSVDTRGAPVFTAGAAEELPNQVQTDIRFVEVSRSKLKQASTSFVRRGGNLWVLGAPGSLGDIKVNADGSGLGGTFGTGSSGFNLIFGG GKWLSFMNALEGSGFAYTLARPSLVAMSGQSASFLAGGEFPIPVPNGTNDNVTIEYKEFGIRLTLTPTVMNNRRIALKVAPEVSELDYSAGIQSGGVAVP ALRVRRTDTSVMLADGESFVISGLTSSNSVSNVDKFPWLGDIPILGAFFRSTKLDKDDRELLMIVTPHLVQPLAADAQLPDLPGEGLRHYDPGFSRLYFL ERGEYDGQQNDTGLSD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site