Pseudomonas aeruginosa JMM, RLJV_17785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain JMM contig030, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTTCCTCTCGGTGTTCAACGCCATCGTCGCCATCGTCATCCAGAGCGCCCGGGTGATCTTCAGCAGCGGTCGCGACGCGCTCTGGATGCCGGCGTTGAAC CGTGCCTTCACCCGTATCCATCCGCGCTGGGAATCGCCCTGGCTGGCCACGCTGTTCCTCGCCATTCCCTCGGCGGCGCTGAGCTTCAGCTCCAACCTGG CCGAACTGACCTCGTTCACCGTGTTGCTGATCGTCATGGTCTACCTGATCGTCGCCCTCTGCGCGCTGTTCAGCCGGGTGCTGCGGCGCGACCGCGAGCA TCCCTACCGGATGCCGCTGTGGCCGCTGCCGGCGCTGCTGGCGGTGAGCGGCGCGGGATACCTGCTGCTCAACCTGTTCCTGGCGGCCTCGGCCAGGGAC GTGATGATCATTGTCGGACTGCTGGCGGTGTCGGTGATTCTCTACTGCACCTACGGCAAGCTCAGTCCGGCGTTCCAGAAGCTTTGAAACAGGAGTCCGC
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| DNA Sequence for Gene |
>RLJV_17785
ATGCGCGCTCGACAACTTGGCATCACCCTCGGCCTGGGCACTCCCGGCCCGTTCAACGCGATCACCGACGTTCCCGGCGTGCGCGTCGGCCACAGCACCC TGAACCAGCGGATCGACGGCAGGCAGGTTCGCACCGGCGTCACCCTGGTCCAGCCGCGCGCCGGTGCGGCGCGCCTGCAACCCTGCTTCGCCGGCTGCCA TGTGCTCAACGGCAACGGCGACGCCACGGGCCTGGAGTGGATCCGCGAAGCCGGCCTGCTGACCACCCCGATCGCCATCACCAATACCCACAGCGTCGGC GCGGTGCGCGACGCGCTGATCGCCGAGGAGCGCGCCGAACTCGGCGACAGCGGGCTGTACTGGTGCATGCCGGTGGTGATGGAGACCTTCGACGGCCTGC TCAACGATATCTGGGGCCAGCATGTCGGCGCCCGCCAGGTCGGCGAGGCGCTGGCCTGCGCCGAGTCCGGACCGGTCCGCGAAGGTTCGGTGGGCGGCGG TACCGGGATGATCTGTCACGAGTTCAAGGGTGGCATCGGTAGCGCATCGCGGCGGCTTCCGGCGGAGCAGGGCGGCTGGACGGTGGGCGCGCTGGTCCAG GCCAACCACGGCCAGCGCCGCGAGCTGCGGGTCGACGGCTATCCGGTCGGCCGCCGGTTGGGCGACATCCCCTCGCCGTTCAGCGAGGAAGGCACCCCGG GTATGGGCTCCATCGTGGTGATCCTGGCCACCGATGCGCCGCTGTTGCCGCACCAGTGCCAGCGCCTGGCGCAGCGCGCCTCGATCGGCATCGCTCGCAC CGGCGGTGGCACCGAGGACTCCAGCGGCGACGTGTTCCTCGCCTTCGCCACCGGCAACCAGGACCTGCCGCCAGCCGACTATGCGCGCAAGGACCTGCCG CAGAGCACGCCGCTGCGGATGCTCAACAACGACCACATCTCGCCGTTGTTCGCCGCGGCGGCGGAGGCGGTGGAAGAAGCCATCGTCAACGTGCTGCTGG CCGGCGAGGACATGCGCACCGAGGACGGCCGGCTGGTGCCCGCGCTGAAGGGGGAGACGCTCCTGACGGCGCTGCGCGAGACCGGCTGGCCGGGACGCTG A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGCGGCTCAGCGCCAGCCGCGGGTGCGCGCCACCGCTTCGCTGAAACGCACCTGCCAGCGCCGGGCGGTGCCGGCGTCGACCCGCGGCTGGAACTCCGT GCGGGTGTTGCGCGGCTCCGCCAGCTCGTAGCCGAGGCCACGCGCGGCAAGGGCGGCGCAACCGAAGGCGGTGAGTTCGTCGAAGCGCTGGGTGACGATG CGCCGTTGCAGGCTGTCGGCGAGGAACTGGGCGAAGTAGGGGCTGCGCGCCAGGCCGCCGTCGATGGACAGGCGGTCGGTGACCTTCAGGTAGCCGTCCA TCGCCTGGATCACCTCGGCGCTGCGCAGCACCACGCCTTCGAGCAGGGCCTGGCAGAGGTCCTCGCGGCGGGTGCCGGCGTCCATTCCCAGCCACATCGC GCCGGCGCTGCGGTCCCAGTGCGGGCATGCGAGTCCCGACAGGGCCGGGACGAAGGCCAGGCCGCGCTCGATGGCCGGCGGCCGGTCGAAGCCGGCCAGT
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| Amino Acid Sequence |
>D-aminopeptidase
MRARQLGITLGLGTPGPFNAITDVPGVRVGHSTLNQRIDGRQVRTGVTLVQPRAGAARLQPCFAGCHVLNGNGDATGLEWIREAGLLTTPIAITNTHSVG AVRDALIAEERAELGDSGLYWCMPVVMETFDGLLNDIWGQHVGARQVGEALACAESGPVREGSVGGGTGMICHEFKGGIGSASRRLPAEQGGWTVGALVQ ANHGQRRELRVDGYPVGRRLGDIPSPFSEEGTPGMGSIVVILATDAPLLPHQCQRLAQRASIGIARTGGGTEDSSGDVFLAFATGNQDLPPADYARKDLP QSTPLRMLNNDHISPLFAAAAEAVEEAIVNVLLAGEDMRTEDGRLVPALKGETLLTALRETGWPGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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