Pseudomonas aeruginosa JMM, RLJV_11295
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain JMM contig021, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCCTGCAACTGCTGGCTGCCCCGGCGCAGCAGGGTGCGCACCCGGGCGAGCAGTTCGACGAAGGCGAACGGCTTCACCAGGTAATCGTCGGCGCCTTGT TCGAGGCCGCGCACGCGGTCCTCTACGGCATCGCGGGCGGTCAGGAACAGCACCGGTACGGTCATCCCGGCGTCGCGCACGCTGCGCAGGATCTGCCAGC CGTCACGGCCGGGCAGCATGACGTCGAGGATCAGCAGGTCGTAGTCGCCGCCCAGGGCCAGTTGCTCGCCCTCGTTGCCATCGTCGCTCAGGTCGACGGC GAAGCCTGCCTCGGCGAGCCCCTGGCGCAGGTACTGGCCGATGCGCGGTTCGTCTTCGACGATCAGCAGTTTCATGTTCATCCCTCGTTACATTTGCCGG CCATGCCGACCTGTTTCTGACAGCATCGTAATCAGTGGGTAACGGGGGCGACAGTGGCCCCCGCGCAGACTACAGGGGAACTCATTCGAGGAGACTTCCC
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| DNA Sequence for Gene |
>RLJV_11295
ATGCGTACCTTCACTGCCTCCACCCTCGCTTTCCTGCTGGTCCTCGCCCCGACCGTTCCGGCCATGGCCGACAGCGGCGGCGACATCGTCTTCGAGCGCA TGCAGGCCCAGGCCGCCAAGGCTCGTGCCGCGCACCAGGAGAAACTGGCGAAGCAGGCCGAAGCGACGAAGAAGGACAAGGAAAACTGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCCAGTTCTTCCACCCCCGGCTCCACACGGGATGACGGAGGGCTCCGATCCCGTCTTCACCCGCCACCGGTTCCCTGGTTTCCGGTCGGCGGGTTTTT TATGCCCGTCGGTGGCGCTGGGCGATCTTAGCCTTCGCGGTCCGCAACGGCGGCAAGCTGACAAAGATGTAATGCTCCCGACAGCCAGCCGGCAGGCGCA GCGACACAGGATAGGCGACATCAACCCGATGGAGATTCCCCGTATGTTTCCGCGCCGCCTGCTTCCCGCTTCCCTGATCGTCCTCGGCGTGCTTTTCGGT GCCAGCGCCCAGGCTTCGCCGGCCCACGGCCAGGCCTTCGGCAAGCCGGCCCAGGCCGCGCAGGCCAGCCGCAGCATCGAGGTGGTGCTCGGCGACATGT ACTTCAAGCCGCGGGCGATCGAGGTCAAGGCCGGCGAGACGGTCCGCTTCGTGCTGAAGAACGAAGGCAAGCTGTTGCACGAGTTCAACCTGGGAGACGC
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| Amino Acid Sequence |
>repressor
MRTFTASTLAFLLVLAPTVPAMADSGGDIVFERMQAQAAKARAAHQEKLAKQAEATKKDKENC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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