Pseudomonas aeruginosa PAG, DR97_4164

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain PAG scaffold1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCTTCTTGTTTCCCAGCAGCAGGCCGATGGCGCCGGCCGCCAGGGCTCCGCCGCCGGCGCCGGAAAGCAGGCTGCCGAGCTGTCCGCCGCCGCTGGCGC CGGGCTTGCCGCCGGACTTGTTCTGCAACATTTCCTGCCCGGACTTGAGCAATTGGTCGAGCAAACCACGGGTATTCATGAGGAACCTCCAGGACGTTCG GTAACAACCGGATTCGACCGACTCTAGCCCTTCGCGTCCGCGCTGCCCGCCGGGAGTTTGCTTCGAGATATTGCCGGCCTCCCCGGACACCGTGGTAAAG CGCGACACATGTCACATTTCTCCAGATAGAGGCCTAGTGCCAGCAGAAAGCCCTTCGACGCGCCGGCATGGCCCTCTAAACTCCGCGCCCGCCCGCGACT GCGGGTCGGCGTCCGACGCCAGCCGCTCCGCGCGCATTCGCAACAGCAATCTGTGAACATGGCTCCCCCGAGCCACCCACTGCCTCGCAAAGGACTTCCC
DNA Sequence for Gene
>DR97_4164
ATGACCATCTCCCGCCGCGACTTCCTGAACGGCGTAGCCCTGACCATCGCCGCAGGCCTGACCCCCGCCGAGATCCTCCGCGCCGCCCCCGGCGGCCGCT ACTATCCGCCCGCGCTCACCGGCCTGCGCGGTAGCCATCCGGGCGCCTTCGAAGTCGCACACCAGATGGGCTGGGAGAAGAAGACCTTCGATGTCGACCA CCTGCCGATCGAAGAGGAATACGACCTGGTGGTGGTCGGCGGCGGCATCAGCGGCCTCGCCGCCGCCTGGTTCTATCGCGAACGGCACCCCGCGGCGCGC ATCCTGGTCATCGAGAACCACGACGACTTCGGCGGCCATGCCAAGCGCAACGAATTCCAGGCCGGCGGGCGCACTATCCTCGGCTACGGCGGCAGCGAGT CGCTGCAATCGCCGAACGCCCTCTATAGCGAAGACGCCAAACACCTGCTGAAACGCCTGGGCGTCGAGCTCAAGCGCTTCGAGACAGCCTTCGACACCGA CTTCTACCCCGGCCTGGGCCTGTCCCGCGCGGTGTTCTTCGACAAGGCCAGCTTCGGCGTGGACAAGCTGGTCAGCGGCGACCCGACGCCGATGGTTGCC GACGAGGTCCCCCGCGATCGTCTCAATGCCCGCTCCTGGCGCGCCTTCATCGGCGACTTCCCGCTGAGCCGCGAAGACCGGGAGGCGCTCATCGCGCTGT ACGAGTCACCTCGCGACTATCTTGCCGGCAAGAGCGTGGAAGAGAAGGAAACCTACCTGGCGAAGACCAGCTACCGCGACTACCTGCTCAAGAACGTCGG GCTCTCGGAAACCTCGGTGAAGTACTTCCAGGGCCGCAGCAACGACTTCTCTGCCCTCGGCGCCGACGCCCTGCCGGCGGCCGACGCATACGCCGCCGGC TTTCCCGGCTTCGACGCCCTCGGCCTGCCGCAACCCAGCGAGGAGGCCCAGGCGGAAATGGACGAGCCGTACATCTACCATTTCCCCGACGGCAACGCCT CGCTGGCTCGGCTCATGGTGCGCGACCTGATCCCCGCGGTGGCGCCGGGCCGAGGCATGGAGGACATCGTCATGGCCCGCTTCGACTACTCGAAGCTGGA CCTCGCCGGGCACCCGGTGCGCCTGCGCCTGAACAGCACCGCCGTCAGCGTGCGCAACCGCGCCGGCGGCGTCGATGTCGGCTACAGCCGCGCCGGCCAC CTGCACCGGGTACGCGGCAAGCACTGCGTGATGGCCTGCTACAACATGATGGTGCCGTACCTGCTGCGCGACCTCTCCGAGGAGCAGGCCCACGCGCTGA GCCAGAACGTCAAGTTCCCGCTGGTGTACACCAAGGTATTGCTGCGCAACTGGCAGGCCTGGAAGACCCTCGGCATCCACGAGATCTACGCGCCGACCCT GCCCTACTCGCGGATCAAGCTGGACTTCCCGGTCGACCTCGGCAGCTACCGGCATCCACGCGACCCGCGGCAGCCGATCGGCGTGCACATGGTCTACGTG CCGACCACCCCGAACGCCGGCATGGACGCCCGCACCCAGGCTCGCGTAGGCCGCAGCAAGCTCTACGCGATGAGCTTCGAGCAACTGGAAAAGGACATCC GCGACCAGCTCCAGGCCATGCTCGGCCCGGCGGGCTTCGACCACCGCCGCGACATCACCGGCATCACCGTGAACCGCTGGTCGCACGGCTACTCCTACTT CATGAATACCCTCTACGACGACGAGGCGGAAAGCGAAGCGCTGATGGAACTGGCGCGAAGCAAGGTCGGCAATGTCGCCATCGCCAACTCGGATGCGGCC TGGGATGCCTACGCCCATGCCGCCATCGACCAGGCGGTGCGGGCAGTCCGCGAACTGGGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGACGGCGACGGCAGCGGAACCCGCGCTGCCGTCGCGCCCTTCCGATGTCCAGCAAGACTGACAGAAATGTACTGACAGCGATTTCAACCCCTACTCCA CGAAAGCCGTTCAAAGACCCTATGTTTCTCGGCCTCCCCTCGAAATAACCTAGGGAAAACACATAGGAAATTTCCTACTAGCATTCAGAAAAGTCCTGAT TAAACCGACAGACACCATCGCTAGAATTCGAGCCCGTCCGGAGCTGCCTCCTGGCGGATTATCCGCCTGCCGGCGTTGCCGGTAGCCGCTGCGGAAACCT CCACCTCGATCGGGTTCGATTTCATGAAAACACGCGTCATCCTCGTCGACGACCACGCCCTCACCCTGATCGGCATGCGCTATCTGCTGAGTGCGTACGA CGACCTGCGGATCGTCGCCCAGGCCCAGGACGCCGATGGCTTGCTGGCGCAGCTCGAAGCGCACCCCTGCGACCTGCTGATCACCGACCTGATGATGCCC
Amino Acid Sequence
>spermidine dehydrogenase
MTISRRDFLNGVALTIAAGLTPAEILRAAPGGRYYPPALTGLRGSHPGAFEVAHQMGWEKKTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPAAR ILVIENHDDFGGHAKRNEFQAGGRTILGYGGSESLQSPNALYSEDAKHLLKRLGVELKRFETAFDTDFYPGLGLSRAVFFDKASFGVDKLVSGDPTPMVA DEVPRDRLNARSWRAFIGDFPLSREDREALIALYESPRDYLAGKSVEEKETYLAKTSYRDYLLKNVGLSETSVKYFQGRSNDFSALGADALPAADAYAAG FPGFDALGLPQPSEEAQAEMDEPYIYHFPDGNASLARLMVRDLIPAVAPGRGMEDIVMARFDYSKLDLAGHPVRLRLNSTAVSVRNRAGGVDVGYSRAGH LHRVRGKHCVMACYNMMVPYLLRDLSEEQAHALSQNVKFPLVYTKVLLRNWQAWKTLGIHEIYAPTLPYSRIKLDFPVDLGSYRHPRDPRQPIGVHMVYV PTTPNAGMDARTQARVGRSKLYAMSFEQLEKDIRDQLQAMLGPAGFDHRRDITGITVNRWSHGYSYFMNTLYDDEAESEALMELARSKVGNVAIANSDAA WDAYAHAAIDQAVRAVRELG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site