Strain | Pseudomonas aeruginosa strain PAG scaffold1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATACCGCGCCGGCGCCACGGTTCTGGTTGAAGGCGTTGACCCGGAAACGCGCGACGCCCGGCACCTCGAAGGAGAAGTCGGTCTCGAGGAATTCCTCGAA GTCCTTGCGCTGCTTGTCGTTCATGATGTCGTAGATCAGCGCATGCACCTGCTTGTGTTCCAGCGGTGGCAGGTTGATCCGGCGTACATCGCCATCCACC CGGATCATGGGCGGCAGGCCGGCGGAGAGGTGCAGGTCCGAAGCGCCCTGTTTGGCACTGAAGGCGAGCAGCTCGGTAATATCCATGGGACTCCCCAATT ACAAGCAAGCAGGTAGAATGCCGCCAAAGCCGCCGTCTCGGACAAGGAAAACACCGGATGAACCAGGGTGCTTCCAGGACACGCGTGGTGTCCTGCGCCA GACGCGGAACCTCGACACTGGAACAGGAAGATGGCCATCGAGGCCGGCGGTTTCGAGGGCGTCTAGCCGACGCCGACCGCACTTCCATAGGGCGCAGGTA
|
|
DNA Sequence for Gene |
>DR97_3362
ATGTCCACGATAGCAGAGAATATTGCAAAGGTTGCCGCGCGCATCCGTGAGGCAGCGCAAGCTGCGGGGCGCGATCCGGCCACGGTCGGCCTGCTCGCCG TGAGCAAGACCAAGCCCGCCGCCGCGGTGCGCGAGGCGCACGCCGCCGGCCTTCGCGACTTCGGCGAAAACTACCTGCAGGAGGCCCTCGGCAAGCAGGC CGAACTGGCCGACCTGCCCTTGAACTGGCACTTCATCGGCCCCATCCAGTCGAACAAGACGCGGCCCATCGCCGAGCATTTCCAGTGGGTGCACTCGGTG GACCGGTTGAAGATCGCGCAGCGCCTGTCGGAGCAACGCCCGGCCGGGCTGCCGCCCCTGAATGTCTGCCTGCAGGTCAACGTCAGCGGCGAAGCCAGCA AGTCCGGCTGCGCCCCCGAGGACCTGCCGGCCCTGGCCGAGGCCGTGAAGCAACTGCCCAACCTCCGATTGCGTGGCCTGATGGCCATCCCCGAACCCAC CGCCGAACGCGCCGCGCAACACGCCGCGTTCGCCCGCCTGCGCGAACTGCTGCTGGACCTGAACCTTGGCCTGGACACCCTGTCCATGGGCATGAGCGAC GACCTCGAGGCAGCCATCGGCGAAGGTGCGACCTGGGTCCGCATCGGTACCGCCCTGTTCGGCGCCCGCGACTACGGCGCGCCGGCTTCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AGGAATCCCCTATGAGCACACCCCGCATAGCGTTCATCGGCGCCGGCAACATGGCCGCCAGCCTGATCGGCGGCCTGCGCGCCCAAGGCGTGCCGGCGGC GCAGATCCGCGCCAGCGACCCGGGCGCCGAGCAACGCGCGAAGATCGCCGGCGAGTTCGCCATCGACGTGGTCGAGTCCAACGCCGAGGCCGTGGCCGAC GCCGACGTCGTGGTCCTGTCGGTCAAGCCGCAGGCCATGAAAGCCGTGTGCCAGGCCTTGGCGCCGGCGCTGAAGCCGGAGCAACTGATCGTCTCCATCG CCGCCGGCATCCCCTGCGCCAGCCTCGAAGCCTGGCTCGGCCAGCCGCGCCCGGTGGTCCGCTGCATGCCCAACACCCCGGCGCTGCTGCGCCAGGGCGC CAGCGGGCTGTACGCCAACGCGCAGGTCAGCGCCGCGCAACGCGAGCAGGCCGGGCAGTTGCTGTCTGCGGTAGGCATCGCCCTGTGGCTGGACGACGAA
|
|
Amino Acid Sequence |
>hypothetical protein
MSTIAENIAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPIAEHFQWVHSV DRLKIAQRLSEQRPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQLPNLRLRGLMAIPEPTAERAAQHAAFARLRELLLDLNLGLDTLSMGMSD DLEAAIGEGATWVRIGTALFGARDYGAPAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|