Pseudomonas aeruginosa PAG, DR97_2970
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain PAG scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGGCCCGATGCTGCTCAAGGTGAGCACGCCGATTTCCGCCGCGGACACCGGCGGCAGCCTGCACGACCGGCTCGCCGCGCTCGGCCCGAAAGCGGTGG TCGAAGCCATCGCCGGCCTGGCCGCCGGCACCCTGCATGGCGAGATCCAGGACGACGCCCTGGCCACCTACGCGCACAAGCTGAACAAGGACGAGGCACG CCTCGACTGGAGCCGTCCGGCCGTCGAACTGGAGCGCCAGGTCCGCGCCTTCACCCCCTGGCCGGTCTGCCACACCAGCCTCGCCGATGCTCCGCTGAAA GTCCTCGGCGCCAGCCTGGGGCAGGGCAGCGGGGCGCCCGGAACCATCCTCGAGGCCAGCCGCGACGGCCTGCTGGTCGCCTGCGGCGAAGGCGCCCTGC GCCTGACCCGCCTGCAAGTGCCGGGCGGCAAGCCACTGGCCTTCGCCGACCTCTACAACAGCCGCCGCGAGCAATTCGCCGCCGGCCAGGTGCTCGGCCA
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| DNA Sequence for Gene |
>DR97_2970
ATGAACCCGCGTCTCGCCGCCTGCCAGGCGCTGGCCGCGGTGCTCGCCGGACGCGCCTCGCTGTCTGGCGCGTTGCCGCCGCAACTGGACAAGGTCGCCC CGCGCGATCGCGGCCTGACCCAGGAGCTGGCCTTCGGCGCGGCGCGCTGGCAACCGCGCCTGCAGGCCCTGGCCGCGCGCCTGTTGCAGAAGCCGTTCAA GGCCGCCGACACCGATATCCACGCCCTGCTGCTGATCGGCCTCTACCAGTTGCTCTACACGCGGATTCCGCCGCACGCCGCGATCGGCGAGACCGTCGGC TGCGCCGACAAGCTGAAGAAGGGCTGGGCCAAGGGCGTGCTCAACGCCGTGCTGCGCCGCGCGCAGCGCGAAGGCGAGACGCTGCTGGCCGAGGTCGACC GCGATCCCTCAGCGCGCCTGGGACATCCGCGCTGGCTGCTGAAAGCGCTCAAGCAGGCCTGGCCGGAGCAGCTCGACGCGCTCTGCGCAGCGAACAACGC ACACCCGCCGATGACCTTGCGGGTCAATCGGCGCCACGGCGAGCGCGATGCCTACCTGGCCGAACTCGCCGAAGCCGGAATCGAGGCCCGCGCCTGCGAC TACAGCCGCGACGGCATCCAGCTCGCCGCGCCGCGCGACGTGCGCGAACTACCGGGCTTCGCGGAGGGCCGCGTCAGCGTCCAGGACGAAGCCGCGCAAC TGGCCGCCGAGCTGCTCGAAAGCGCGCCCGGCCAGCGTGTCCTCGACGCCTGCTGTGCGCCTGGCGGCAAGACCTGCCACCTGCTGGAAACCCAGCCGGA ACTGGCCGAAGTGGTCGCCGTCGACCTCGAGGAGAGCCGCCTGGTAAGGGTCCGGGAAAACCTCCAGCGGCTCGGCCTGCAAGCCAGCCTGGTCGCCGCC GACGCCAGGGCCACCGGGGAGTGGTGGGACGGCAAGCCGTTCCAGCGCATCCTCCTCGACGCGCCGTGCTCGGCCACCGGGGTGATCCGCCGCCACCCGG ACATCAAGCTGGCGCGCAAGCCGGAAGACATCGCCGCCCTGGCGCACCTGCAGGGTGAATTGCTCGACGCGCTGTGGCCTACCCTGGAAGTCGGTGGCGT ACTGCTCTACGCCACCTGTTCGGTGATGCCGGCGGAAAACAGCGACAGCATCGCCGCCTTCCTCGCCCGCACGCCCGGCGCCCGCGAACTGGACCTTCCC GGCCCCTGGGGCATGAAACAGCCCCACGGCCGCCAGTTGCTGCCGCAGGTGGAGGGCCACGATGGCTTCTACTATGCCAAGCTGATCAAGATATCCGCCC GTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGAAACCTGACGAGCCGTTTCCTGCATGAAAATCATCATCCTCGGTGCCGGCCAGGTCGGCGGCACACTGGCCGAGCACCTGGCCAGCGAAGCCAACGA CATCACCGTGGTCGACACCGACGGCGACCGCCTGCGCGACCTCGGCGACCGCCTCGACATCCGCACCGTGCAAGGCAAGGCCTCGTTCCCCACGGTGCTG CGCCAGGCCGGCGCCGACGACGCCGACATGCTGGTGGCGGTGACCAATAGCGACGAGACCAACATGGTCGCCTGCCAGGTCGCCTACACCCTGTTCAACA CCCCGACCAAGATCGCCCGCGTCCGCGAGCCGGCCTACCTGACCCGTACCGGGCTGTTCGACAACGAGGCGATCCCGGTGGACGTGCTGATCAGCCCGGA GCAGGTGGTCACCAACTACATCAAGCGCCTGATCGAACACCCCGGCGCGCTGCAAGTCATCGACTTCGCCGAGGGCAAGGCGCAGTTGGTCGGGATCAAG
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| Amino Acid Sequence |
>16S rRNA methyltransferase
MNPRLAACQALAAVLAGRASLSGALPPQLDKVAPRDRGLTQELAFGAARWQPRLQALAARLLQKPFKAADTDIHALLLIGLYQLLYTRIPPHAAIGETVG CADKLKKGWAKGVLNAVLRRAQREGETLLAEVDRDPSARLGHPRWLLKALKQAWPEQLDALCAANNAHPPMTLRVNRRHGERDAYLAELAEAGIEARACD YSRDGIQLAAPRDVRELPGFAEGRVSVQDEAAQLAAELLESAPGQRVLDACCAPGGKTCHLLETQPELAEVVAVDLEESRLVRVRENLQRLGLQASLVAA DARATGEWWDGKPFQRILLDAPCSATGVIRRHPDIKLARKPEDIAALAHLQGELLDALWPTLEVGGVLLYATCSVMPAENSDSIAAFLARTPGARELDLP GPWGMKQPHGRQLLPQVEGHDGFYYAKLIKISAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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