Strain | Pseudomonas aeruginosa strain PAG scaffold1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCCAGGGCTGGGCCTGGGGCATCGCTCTGCCCGTCAGCTACCTGCTGTTTTTCAAGCGCGCAACCTCATAAAAAAATACCCCGGACCCGCGCCGAGTAT TTCTTGCGGAATGGAATCAGGGCGATCGGCAAGCTGATCGCACCCTGATCTGCAAGAGATTCGCCGTGAACACTCCACATCCATCCCTTCGCCGAAGCTG CCTGGCCGCCTTGGCCTGCAGTGCGCTGGTCGCACAGGGAGCCTTCGCAGCGAGCGCCTCCGAGCAGGCGAACCTGGAGGTGATGATCCGGCAGCTCAAC GCCCTCGAGGACACCGCCCGCCGCAGTGCCCAGGGCGCCGATGAGCCCGGACAGCGCTTCTACTTCGACTACTCGCGCCTGGCCGCTGACCTGCAGCGCA TCCGCCAAGGCCTGCAGGACTACATGACACCCAGCCGCGCCCAGCCGCGTGACCCTTCCGACCTATCTGGGGATTACACCCTGCGCGGAGGGCCGATGCC
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DNA Sequence for Gene |
>DR97_RS0106820
GTGAGCATGAGTGGAGCCCAAACATCAGCGTTCCAGGCCGCCGCTGGCTTTCCCCCATCGGCCGGCGAGGGGCTGTTCATTGGAGCAGCGATGACCTTCC TTCTGCTGTGGTCCGCCTGGGCGATGTACAGCACCTGGCGTGGCTGGGCCACCAACAACCTCGACAGCGCCACTGCCGGCGTTTCCGCGATACGGATCGT GGTCCTCCTCAGCATCACCTCTTTCTTCCTCCTCAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCATACGGAGACACTCATGCTGAAATTCACCCTCCAGAAACTGTCCACCCTCTGCCTGCGCCTGGCTGCCATCTCTTTGGTACTCCCAGGCGTCGCCTT GGCTGCACTCCCCAAGCCCGAGGCGCCTAGCCGCGGGGAAGGATCGGGGATCATGCAAACCATCCAGAACTTCGGCTATGACGGAGCGATGCTCCTCGCG CTACTCATCTGCGTGGCTGTCTTTCTGGGAGTCTCCTGGCATACCTACGGCACCTATCACGCCATCCATGATGGGAAAAAGAAGTGGTCGGATCTCGGAG CGGGCGTGGCCGTAGGCATCGGCCTGCTGATCTTGATCATTTATCTCGTCACCAAAGCCACCACCATCATGTAAGGGCCTTCCCATGCCCGAAGAACATC TGTTTCAGGATGGGACCCTCAGCTTCCTGCCGACCCGTTTGAACCGGCAACCGGTGGTCATCGGCGGTCTGACTGCGGACGAAATGTGGATCACGGTCCT
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Amino Acid Sequence |
>integrating conjugative element protein
MSMSGAQTSAFQAAAGFPPSAGEGLFIGAAMTFLLLWSAWAMYSTWRGWATNNLDSATAGVSAIRIVVLLSITSFFLLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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