Pseudomonas putida BIRD-1, PPUBIRD1_4691 (motB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida BIRD-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCATGACCGCGTTCGTCTGCGATTACCTGCGCATCATGTCCACCGGCAACATGGCCCCGCACGAGCTCGAGGGCCTGTTCGACATGGAACTGCTGAG CATGAAGGAAGAGCTGGAGCACCCGTCCCACGCGGTGACCGGCATCGCCGACGGTATGCCCGGCTTCGGTATCGTTGCGGCGGTACTGGGTATCGTGGTG ACCATGGCCTCGCTGGGCGATGGCGATCAGGCGGCCATCGGCATGCACGTAGGTGCGGCGCTGGTGGGTACCTTCTTCGGTATTCTGGCGGCTTACGGTT TCTTCGGCCCTTTGGCCAAGTGCCTGGAGCACGATGCCAAGGAAGAACTGAACCTCTACGAATCGATCAAGGCTTCGCTGGTGGCCTCGGCGTCGGGCAT GCCACCTTCGCTGGCGGTCGAGTTCGGGCGCAAGGTGCTGTACCCCAAGCACCGCCCAAGCTTCGCCGAACTGGAACAAGCGGTTCGCGGTCGCTGAGTC
|
|
| DNA Sequence for Gene |
>PPUBIRD1_4691
|motB
ATGGAGAACAATCAGCCCATCATCGTCAAGCGCGTCAAGCGCTTTGGCGGCGGCCACCATGGTGGCGCCTGGAAAATCGCCTTTGCCGACTTCGCCACGG CGATGATGGCGTTCTTCCTGGTGCTGTGGCTGTTGTCCACGGCCACGCCTGAGCAGAAGATCGCCATTGCCGGCTACTTCCAGGACCCTATTGGTTTCTC CGAGAGTGGCACGCCTTATGTCATCGACCTGGGGGGTTCACCGGAGATGGCGCCGGACAAAACCATCAATCCGGAAGTGAAGACCGAGCCGACGCAGCAG TCCCCCACTCAGCTGAGCAAGGACCAGGTCGAGACCATGGCCGAGCAGGTTGAGCGCGAGCGTCTGGAGCTTTTGCTGCAGGAACTGCAGAACAAGGTGG AAGAGAACCCACAGCTGCAGAAGTTCAAGGACCAGATCCTGTTCGAGATCACCCAGGACGGCCTGCGCATCCAGATCATGGATGCCGAGAACCGGCCGAT GTTCGACATTGGTAGCGCGCGCCTGCAGCCTTACTTCGAAGATATCCTGCTGGCCATGGCTGACACCATCAAGGCGGTGCCGAACAAGATCAGCATCAGC GGCCACACCGATGCCAAGCCGTATGCGGGCACTGGCGAGTACGGTAACTGGGAGCTGTCGGCCAACCGCGCCAACGCCGCGCGGCGTGCCCTGGTGGCGG GTGGTTACCCGGACGGCCAGGTGGCACGGGTGGTGGGGTACGCCTCGTCGTCACTGTTCGACCGCAAGGACCCGTTCAACCCGGTCAACCGCCGTATCGA CATCATCGTGCTGACCAAGAAAGCCCAGCGCAATATCGAAGGTGAGCAGGGGGCGCCGGAAACGCCGCCAGCTGCGCCAACTGCACCTGCAGCGCCAGCC AGTGGTGCTGCGCCAGGGGCTTCGGCACCGGCTGACCCAGGGGCAACTGAACAGCCACCGATGCAACCGCGCGAGCTGCGCCAGAAGCTGAACATCTTTG AAGATGGCACGCTGAAGATGGATGAAGCCAAGGAGCAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGGCTTTTTGGTGCGGGCAACTGTGCTACCCAACACCTGAACGCTGGCGCGATCACTGTAGGAGCGGGTTTACCCGCGAAGCCTCCAGTGCGGTGAATG GCACCGGCGTTGCCGGTGTTCGCGGCTAAAGCCGCTCCTACAAGGGATCGCGGCAACTTTCATTTCGAGCGTTTCAGTAGCTGTCTTCTGCCAGGCTGGC GATGATCGAGCGGTAGCTGTTCATGCGCTGCGGCTTGATGCGCCCCTCTTCCAGTGCCTTGAGCAGCGCGCAGCCCGGTTCGCGGTCATGCTTGCAGTCG CGGAAGCGGCAGGTGCCGAACAGGTCGCGGAACTCGATGAAGCCATCCTCCACGTCGTCGCGGCTGACATGGCCAAGGCCGAACTCGCGGATACCCGGCG AGTCGATCAGGTCGCCGCCGTTGGGGAAGTGGTACAGCCGCGCCGTGGTGGTGGTGTGGGTACCCTGGCCTGACCATTCCGACAAGTCGCCGACGCGGGT
|
|
| Amino Acid Sequence |
>MotB
MENNQPIIVKRVKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFQDPIGFSESGTPYVIDLGGSPEMAPDKTINPEVKTEPTQQ SPTQLSKDQVETMAEQVERERLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAVPNKISIS GHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQVARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKKAQRNIEGEQGAPETPPAAPTAPAAPA SGAAPGASAPADPGATEQPPMQPRELRQKLNIFEDGTLKMDEAKEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|