Pseudomonas putida BIRD-1, PPUBIRD1_4593 (nadD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01467
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01467
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009435 NAD biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00482
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016779 nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00482
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppb00760 Nicotinate and nicotinamide metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppb01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase 19 227 30.79446
NCBIfam TIGR00482 JCVI: nicotinate (nicotinamide) nucleotide adenylyltransferase IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase 23 226 3.0E-49
Gene3D G3DSA:3.40.50.620 HUPs IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 18 229 9.8E-71
PANTHER PTHR39321 NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE-RELATED IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase 20 227 3.6E-43
NCBIfam TIGR00125 JCVI: cytidyltransferase-like domain IPR004821 Cytidyltransferase-like domain 21 82 5.2E-8
SUPERFAMILY SSF52374 Nucleotidylyl transferase - - 20 227 3.75E-52
CDD cd02165 NMNAT IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase 21 226 1.78692E-80
Pfam PF01467 Cytidylyltransferase-like IPR004821 Cytidyltransferase-like domain 23 200 6.7E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.