Pseudomonas putida BIRD-1, PPUBIRD1_3844 (pheA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida BIRD-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGAATATCGGCCCAAGCGGTCTGGTGGTGGTGATCGTGCGCGAAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTT TCGGCTGACAACGGGTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCGGGCCTGGTCTTCGAGTGGCTGAAAGAGCAGGGCGGTGTCGAGG CGATGGAGCAGCGCAACCGTGCCAAGAAAGACTGCCTTTACGGGTTCATCGATCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTG GATGAACGTGCCGTTCCGCCTGGCTGACGAGCGCCTGGACAAGGCCTTCCTCGCTGGCGCCGACGCGCGTGGCCTGCTCAACCTCAAGGGCCACCGTTCG GTTGGCGGCATGCGCGCCTCCATCTACAACGCCCTGGGCCTGGAAGCGGTAGAAGCGCTGGTAGGCTACATGGCTGAATTCGAGAAGGAGCATGGCTGAC
|
|
| DNA Sequence for Gene |
>PPUBIRD1_3844
|pheA
ATGTCCGAACAGGAGCTCAAGGCGCTGCGCGTACGCATCGACAGCCTCGACGAGAAAATCCTCGAGCTGATCAGCGACCGCGCCCGCTGCGCCGAAGAAG TGGCCCGGGTCAAGACTGCCTCGCTCAAAGAAGGCGAGAAGCCGGTGTTCTACCGTCCCGAGCGTGAAGCTGCGGTGCTCAAGCGCGTGATGGAGCGCAA CAAGGGCCCGCTGGGCAATGAAGAGATGGCGCGGCTGTTCCGCGAAATCATGTCGTCGTGCCTGGCCCTGGAAGAGCCGCTGAAAATCGCCTACCTCGGC CCTGAAGGCACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGG CGGCCGGTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGAT TTGTGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGACCGACAGCATCACCCGCATCTACTCCCACGCCCAGTCGCTG GCCCAGTGCCGAAAGTGGCTGGATGCGCACTACCCGAACGTGGAGCGCGTGGCCGTATCGAGCAATGCCGAAGCGGCCAAGCGAGTCAAGGGCGAGTGGA ACTCGGCGGCGATCGCCGGCGATATGGCGGCCAACCTGTACGGCCTGACCCGCCTGGCCGAGAAGATCGAAGATCGCCCGGACAACTCCACGCGCTTCCT GATGATCGGTAACCAGGAAGTACCGCCGACCGGCGACGACAAGACCTCGATCATCGTTTCGATGAGCAACAAGCCAGGTGCGTTGCATGAGTTGCTGGTG CCGTTCTATCAGAACGGCATCGACCTGACCCGCATCGAGACCCGCCCGTCGCGCAGCGGCAAGTGGACCTACGTGTTCTTCATCGACTTCGTCGGCCACC ACCGCGACCCGCTGATCAAGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCAGGGGCCTTGGGGCTGCCCTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGAGCTCTGTGGGAGCGGGCTAGCCCGCGAA GGGTCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCTGCGCCCATC ATCGACCGCCTGGTCGTGGTCGGTCTCGGCCTGATCGGCGGCTCGTTCGCCAAGGGCCTGCGTGAAAGCGGCCTTTGCCGCGAAGTGGTCGGTGTCGACC TGGATGCCCCCTCGCGCAAGCAGGCCGTGGCCCTGGGCGTGGTCGACCGCTGCGAAGAAGACCTTGCCGCCGCTTGTGTGGGCGCCGATGTCATCCAGCT GGCCGTACCCATCCTGGCCATGGAAAAAGTCCTCGCGCGCCTGGCCCTGCTCGACCTGGGTGATGCAATCATCACCGACGTCGGCAGCGCCAAGGGCAAC
|
|
| Amino Acid Sequence |
>PheA
MSEQELKALRVRIDSLDEKILELISDRARCAEEVARVKTASLKEGEKPVFYRPEREAAVLKRVMERNKGPLGNEEMARLFREIMSSCLALEEPLKIAYLG PEGTFTQAAAMKHFGHAVISRPMAAIDEVFREVAAGAVNFGVVPVENSTEGAVSHTLDSFLEHDMVICGEVELRIHHHLLVGENTKTDSITRIYSHAQSL AQCRKWLDAHYPNVERVAVSSNAEAAKRVKGEWNSAAIAGDMAANLYGLTRLAEKIEDRPDNSTRFLMIGNQEVPPTGDDKTSIIVSMSNKPGALHELLV PFYQNGIDLTRIETRPSRSGKWTYVFFIDFVGHHRDPLIKAVLEQISQEAVALKVLGSYPKAVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|