Pseudomonas putida BIRD-1, PPUBIRD1_3708 (acpP)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_3708
|
| Name |
acpP
|
| Replicon | chromosome |
| Genomic location | 4159359 - 4159595 (- strand) |
Cross-References
| RefSeq | YP_005931502.1 |
| GI | 386013225 |
| Entrez | 12521887 |
| NCBI Locus Tag | PPUBIRD1_3708 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
protein AcpP
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -14.76 |
| Kyte-Doolittle Hydrophobicity Value | -0.340 |
| Molecular Weight (kDa) | 8.7 |
| Isoelectric Point (pI) | 3.83 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 7PDI | LIPID BINDING PROTEIN | 08/05/21 | Crystal structure of the holo-acyl carrier protein (holo-AcpP) from Pseudomonas putida KT2440. Produced as an apo/holo mixture. | Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) | 1.69 | X-RAY DIFFRACTION | 96.1 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 577 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002616 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_3708
Search term: acpP
Search term: protein AcpP
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
E-value:
2.9e-07
Percent Identity:
41.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
E-value:
2.9e-07
Percent Identity:
41.4
|
References
No references are associated with this feature.