Pseudomonas putida BIRD-1, PPUBIRD1_3375
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida BIRD-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGCGATTCTCAAGGACTACCGCGACCACCTGACCGGCGCGGTGGTGCACTGCTTTACCGGTGAGCGCGAAGCGCTGTACGCCTATCTGGACCTGGACC TGCATATCGGCATCACTGGCTGGATCTGCGACGAACGCCGCGGTACGCACCTGCATCCGCTGGTGGGCAACATCCCTCAAGGCCGGTTGATGCTGGAAAG CGACGCGCCCTACCTGCTGCCACGCAGCTTGCGGCCCAAGCCGAAGAGTGGGCGCAACGAGCCGGCGTTCTTGCCGGAGGTACTGCGCGAAGTGGCCTCG CATCGCGGTGAGTCAGCCGAGCACACGGCAGCGCATACCACCGCAACGGCTCGAGATTTTTTCCAGCTTCCCTGAATCTCGCGGGTTTCTGCGGGCGGGT GAACGCTGTTGATATGCATCAACAAATCCCGTGGTGGATGTGGGCACAATGATGGCACCTTGCCAATATTGTTTCCGCTCAACTCAGAGAAGACCTGCCC
|
|
| DNA Sequence for Gene |
>PPUBIRD1_3375
ATGGGTGCCTGGCTTAGCAATGTTTCCCTGAAGTACAAATTCTGGGCCGTCAATGCAGTGGCCTTTGTCACCACCTTGCTGCTGGTGCTGTACGCCGTGC ACCTGGAGCAACGCGCACGTGCCGAGGCGGCTCAGGGCCAGGCGGTCGCACAAGCCCAGTTGCTGGCCGCCTGGCCAGCCGGGCAAGCACTGCCACGCCC GGCCAACGTCATCAGTTGGTCAACAGGGCAAACGCCAACCTACGCCGGGGAGGCGCTCGATGCCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGC GCCTGGATCCTCGGTGAAAACCCACTGCGTGGCGCACAGGTGTTGCGCAATAGCGACCAGCAGTTGGCTGTGCTGGCCCAGTCACCCAGCCTGCGCCAGG TCTTCTTCGATCGCTTCAGCAATTACGCGGTGTGTGTGCTGATCCTGATGCTGGCCATGCTCGGCGCCTCGCAACTGCTGATCCGCTTCCTGCTCAGCCA ACTCAACACCCTCAAGGACGTGATGCTGCACGTGGAAAAAACCGGCGACCTGTCGGCCCGCGTACCGCTAGCCAGTGGCGACGAGGTCGGCCAGATGGCC GGGGCCTTCAACGCCATGCAGTCCACCTATCACCGCATAGTCAGCACCGTCGCCCAAAGCGCAGCACAGCTGGACTCGGGCGCCGCACGCCTGGCCGCCA GCATGAGCGACGTACGCCATGGCATGCTCGGCCAGCAGAGTGAAACCGACCAGGCCGCCACTGCCATCAACGAAATGTCGGCGACCGTGCACCACATTGC CCAGCACGCCGGTGCCACCCGCGATTTGTCACAAACCGCCGACACCTTGGCCGGCAGCGGCCAAGCGGTGGTCAGCCGAGTGCAGGATTCGATTTCCGGG CTTTCCAGCGGCGTGCAGCAAACTGCCGAGATGATTCGACAGCTAGCCGAGGACAGCCAGAAGATCAACGGTGTAGTCAGTGTGATCCACAGTATTGCCG AGCAGACCAACTTGCTGGCGCTTAATGCTGCCATCGAAGCCGCGCGGGCCGGCGACCTGGGCCGCGGCTTTGCCGTGGTGGCCGATGAAGTGCGTAACCT GGCCATACGCGTGCAAACCTCCACGGATGAAATCACCACCATGGTTTCGGCTCTGCAGTCTGGCACCCGCGATGCGGTGGAGTTCATGCAGGAAAGTTCG TACAAGGCCGACGACTGCGTACGTCAGGCACAGGAAGCCGGTGAGGCGCTGGCTGAAATTACCGGTGCCGTGGCGCAAATGCGCGAAAGCAATACCCAGA TCGCTGTAGCGGCCGAGCAGCAAAGCCAGGTAGCCGAGGAAATGAACCGCGCGGTGGTCAGCATCCGCGATGTCACCGAGCGGACCGTGCAGCAGACGGT CGGTTCGGCGACCACCAGCAGCGAACTGGCGACCCTGGCCGGCGAACTGAACAAGGCCATTGGCCAGCTCAAACTATAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCACCATAGCCAGGTTCGATTGGCCCCCGCTTGGGGGCCGCACTAAGCTTTGGGCATGACCGAGAGGAAATCCCCATGAGCAAACGCCTGCCCAATCTTC CCGCCTGGCAATGGCGCGGCTATCACCATAATCACCGCCACCCGGCCAACCTGGTGTTGCACCTGATCGCTGTGCCGTTGTTCATTCTAGGGGCACTGCT GGTGCTGTCCGGCCTGTTCGGTTTCGACCTCGGCCAGATCGCGGTGGGTGTGATTGCCCTGGTCGCCGCGCTGGGCCTGCAGCGCCAAGGCCACCGCCTT GAAGCCCAGCAGCCCGAGCCGTTCGCCAACCGCCAGGATGCCGTGCAGCGCTTACTGACCGAGCAGTTCATCACCTTTCCGCGCTTTGTGGTGAGCGGGG CCTGGTGGAGGGCCTGGCGCGAACGGCACAAGCACCGACACTGAGCCAGCTGCCGGAGCGCTCCTTGTGAGCAGCCTGGTAAGGATCAGGCGAAAACGGT
|
|
| Amino Acid Sequence |
>methyl-accepting chemotaxis sensory transducer
MGAWLSNVSLKYKFWAVNAVAFVTTLLLVLYAVHLEQRARAEAAQGQAVAQAQLLAAWPAGQALPRPANVISWSTGQTPTYAGEALDALRNAQGWVALPS AWILGENPLRGAQVLRNSDQQLAVLAQSPSLRQVFFDRFSNYAVCVLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTGDLSARVPLASGDEVGQMA GAFNAMQSTYHRIVSTVAQSAAQLDSGAARLAASMSDVRHGMLGQQSETDQAATAINEMSATVHHIAQHAGATRDLSQTADTLAGSGQAVVSRVQDSISG LSSGVQQTAEMIRQLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAIRVQTSTDEITTMVSALQSGTRDAVEFMQESS YKADDCVRQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQSQVAEEMNRAVVSIRDVTERTVQQTVGSATTSSELATLAGELNKAIGQLKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|