Pseudomonas putida BIRD-1, PPUBIRD1_2339
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida BIRD-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCGCAGACCCTGCCAATCCTCATGCTGACTGCCCGCGACGACAGCCATGACCAGGTGCTTGGCCTGGAAATGGGGGCCGACGACTACGTGACCAAACC CTGTGAGCCACGCGTGCTGCTGGCCCGGGTGCGCACGCTGCTGCGCCGCAGCAGTGTCAACGAACCGCGCCTGGACAACGACCTGATCCTGATTGGTGGC CTGCGCATCGACCTGGCCGAGCGCACGGTGAGTTGGCGCGGCGAGGAGGTGGAGCTGTCCAGCGGCGAGTACAACCTGCTGGTGGTGCTGGCGCGCAATG CCGGTGAGGTGATGAACCGCGACCGTATCCTGCAACAACTGCGTGGCATCGAGTTCAATGGCACCGATCGCTCCGTTGACGTGGCCATTTCCAAACTGCG GCGCAAGTTCGACGACAACGCCGGCGAAGCGCGCAAGATCAAGACCGTGTGGGGCAAGGGCTACCTGTTCAGCCGTGTCGAGTGGGAGTGCTGATCGGCC
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| DNA Sequence for Gene |
>PPUBIRD1_2339
ATGCTCAAGATCCTGGTGCGGCTGTACCTGGTGATCATCGTCGCCTATGCCGGTGCATTGCTGTTCATCCCTGACACCATCGTCGGCCTGTTCCGCGACC GGTTCATGGCCTACAACCTGGACCAGGCCAAGGGTGTACAGGCGTTGATCGTGCGCCAGTTCCGCCAGGCCCCGCGCGAGCAGTGGTCAGCGGTGGAGCA GGAGCTGGCCAGTGATTTCGCGCCGCTGGAACTGCAGTTGCAGCGCATGGACCAGGCCGCTTTGAGCGATGAAGAGCAGGCGCGCCTGGAGCATGGTCTG TACGCAGTGCGCATTGCCGAGTGGGGCTATTACGAGACGGTGCTGGCGCCGCTGGACAAGGAGTGGCTGGTAAGCCTGCATTCCCCGCCAGACCCGCTGG ACATCAACGTGCTGTCGTGGGGCGTGACCGTATTGATTGGTGCAGCCATGCTGGGTTGCCTGCTGCTGTGGGTCTGGCCGCACTGGCGTGATCTGGAGCG CCTCAAGGAGACCGCTCGGCGCCTGGGCCAGGGGCAGATGGCCGAGCGTACGCACATTTCGCCTCACTCCAACATTGGTGAACTGGCCGGGGTATTCGAC ACCATGGCCAGTGACCTGGAGCGCCATGTCAACCAGCAGCGTGAACTGCTCAATGCGGTATCGCACGAGTTACGCACGCCACTGACCCGGCTGGACTTCG GCCTGGTGCTGCTGTTCGACGAAGTGCCGCCAGCCAGCCGCAAGCGCCTGCTGGAGCTGGTCGGGCATGTGCGCGAGCTGGATGAACTGGTGCTGGAGCT GCTGTCCTATAGCCGGTTGTACAACGCCGACCAGGCGCGGGAGCGGGTGGAGGTATCGCTGCTGGAGCTGGTCGACAGTGTGCTTGGCGGCTTTGCCGAG GAGCTCGATGGCCGGGGTATCCAATGGGAAGTGCGGGCCGAGGGTGAGTTGCCGCGCTTTGTACTGGACCCGCGGCTGACGGCGCGCGCGGTGCAGAACC TGGTGCGCAATGCCATGCGCTATTGCGATGAAAGCCTGTTGCTGCGCTTGCGCCTGGAAGCCGATGGCGCCTGTCTGCTGACGGTGGAGGATGACGGGAT TGGCGTCCCTGTGGAGGAGCGCGAGCGGGTTTTCCAGCCGTTCTACCGTCTGGACCGCAGCCGCGATCGCAACACCGGTGGTTTTGGCCTGGGGTTGGCA ATCAGCCGCCGGGCGATCGAGGGGCAGGGTGGCACCTTGACCCTGGCGCAGTCGGCGCTGGGTGGGGCGCAGTTCAGGATTCGTTTACCCGCCGGAGGAT AG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGCGCTGCAACCGCGAAGAGACGGGCCTGCTAATCCTGCTCTGCCAGCTCGCTGGACCACGACACAAAGCGGTCCTTGCCAGTGTGCTTGGCTTCATAT AACGCCTGGTCGGCGCGGACCAGCGCGGTGGTCAGGCTCTCTCCCCGGTTGATCTTGGCCAGGCCAATGCTGATGGTGACCGGGTGCTCGCCAGTGTCCT CGCGCACGCGCTGGCACAGCGCTGCCACTCGCTGCTCGGCCCCTTGCTGATCCAGCCCTTCAAAGAAGATCGCAAACTCTTCACCTCCCAGCCGGGCAAA CGCCTGATCGGCCATGCTTGTCTTGATATGCAGGGCCACGCGCTTGAGCACTTCATCGCCCACGTCATGGCCGAAACGGTCATTGACCCGCTTGAAATTG TCGATATCGATCATGGCCAGGTACTGCCCGGACGTCGCCATCCGTAGCTGGCGGTCGGCCTGGGCCATGAACGAGCGGCGGTTGGGAATGTCGGTCAGGG
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| Amino Acid Sequence |
>Integral membrane sensor signal transduction histidine kinase
MLKILVRLYLVIIVAYAGALLFIPDTIVGLFRDRFMAYNLDQAKGVQALIVRQFRQAPREQWSAVEQELASDFAPLELQLQRMDQAALSDEEQARLEHGL YAVRIAEWGYYETVLAPLDKEWLVSLHSPPDPLDINVLSWGVTVLIGAAMLGCLLLWVWPHWRDLERLKETARRLGQGQMAERTHISPHSNIGELAGVFD TMASDLERHVNQQRELLNAVSHELRTPLTRLDFGLVLLFDEVPPASRKRLLELVGHVRELDELVLELLSYSRLYNADQARERVEVSLLELVDSVLGGFAE ELDGRGIQWEVRAEGELPRFVLDPRLTARAVQNLVRNAMRYCDESLLLRLRLEADGACLLTVEDDGIGVPVEERERVFQPFYRLDRSRDRNTGGFGLGLA ISRRAIEGQGGTLTLAQSALGGAQFRIRLPAGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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