Strain | Pseudomonas putida BIRD-1 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCGGTTAAGGCTTACTGGCTCTTTTTGACCAGAAGGGCCAGGTTGGCCAGTTTTGTAGACTCCATCTTGATGGTTTTCATATTTGAATCTCCATTTGTGC GTCGCGGTATTGCGACTTGTCTGATGTTAGCGTCACTTTGAAGATGTACAAGGCAAACTTTGTAGCGAAACTTCCGATGAAGTTGTAGGATTTGTTACCC TTATAGTCACGAGGTGCCAATCCAACTGCGTCGTAAAGCCTCTGGCACAAACCTCACAGCGATTTTGGGAGCAGCGTTGTACCGCCCATATCAATTAGCT CACTGTGCTCCGCACTCGGAGTGGGAGGTGTGGATGGGCGGTCGTGAACTGTGAAGCAACTGGCCATAACCGCGGCTATCGGCATTTTTTGTCCACAAAA ATCGTCCGGCAATGGAACAATTTCACCTGCCCCCATAGGCACCCGGCTGCCTTCATGCTTAACTCAGTGTCCTTTTCAAACCCCGCATAAGGATTTCGTC
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DNA Sequence for Gene |
>PPUBIRD1_2206
ATGGCTCAAGTGACTCTCAAAGGCAACCCGGTCCAGGTCAACGGCAACCTGCCACAGGCCGGCGCCCAGGCTCCGGCTTTCTCCCTGGTAGGTGAAGGCC TGGCTGACAAGTCGCTGAAAGACTACGCCGGCAAGCGCAAGGTGCTGAATATCTTCCCAAGCGTCGATACCCCGACCTGCGCCACTTCGGTGCGCAAGTT CAACGCCAAGGCCAGCGACGTTGCCAACACCGTGGTGCTGTGCATCTCGGCTGACCTGCCGTTCGCCCAGGCTCGTTTCTGCGGCGCCGAAGGGCTGGAG AATGTGAAGAACCTGTCGACCCTGCGTGGCCGCGAGTTCCTCGAAAACTACGGCGTAGCCATCGCCGACGGCCCGCTGGCCGGCCTGGCCGCCCGCGCCG TGGTGGTGCTGGACGAGAACGACAAGGTGCTGCACAGCGAACTGGTTGGCGAAATTGCTGACGAGCCGAACTACGACGCGGCGCTGGCTGTACTGAAGTA A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGATTGCGTGGGGCAGGGCGGGCGTCTGTAGCCTGTGATGGCCCCTTCGCGGGTAAACCCGCTCCTACAACGTGCGGCACAGGTTTCAAAGGCTGTGACA TCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGTAATGGAAACCTTCAGGCCCGCCACCGCTCCAAGCAACACCCTGTAACGGCCCGGAAC ACGTTCCGGGCCGTTTTCATTTAAAATTCCGCCTCTTGGCAACGTCAGGCAAAGGTAAACCTCTGGTAAAGGCCCTTTGCTAAAACGATGGCAGTGCTTA TCGTTCATCCTCCCCAAGTCGTCATTCCGAACAAGGTTCGTTCAACCCATGCAAGCGTCCAATTCCCGTTCCCTTCGTCGCTGGCTCGTCGGCCTGCTGA TCCTGCTGCTGGTGGCTGCACTGGCCTGGTGGCTGTGGCCCGCAGCGACGCCTGCGCATAAAGAAGCCAGTGGCGGGCGCGGTGGCAAGGGCATGGGCAT
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Amino Acid Sequence |
>redoxin domain-containing protein
MAQVTLKGNPVQVNGNLPQAGAQAPAFSLVGEGLADKSLKDYAGKRKVLNIFPSVDTPTCATSVRKFNAKASDVANTVVLCISADLPFAQARFCGAEGLE NVKNLSTLRGREFLENYGVAIADGPLAGLAARAVVVLDENDKVLHSELVGEIADEPNYDAALAVLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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