Pseudomonas putida BIRD-1, PPUBIRD1_2022
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd17365 | MFS_PcaK_like | - | - | 22 | 430 | 1.53222E-85 |
| Pfam | PF07690 | Major Facilitator Superfamily | IPR011701 | Major facilitator superfamily | 33 | 336 | 1.8E-40 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | IPR036259 | MFS transporter superfamily | 16 | 434 | 2.3E-69 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | IPR036259 | MFS transporter superfamily | 7 | 437 | 3.27E-77 |
| PANTHER | PTHR23508 | CARBOXYLIC ACID TRANSPORTER PROTEIN HOMOLOG | - | - | 12 | 432 | 1.2E-71 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.