Pseudomonas putida BIRD-1, PPUBIRD1_1985
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida BIRD-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCACCTATCGCTGCCGCCTTGGCAGTCTCGTCCATCTTGCTATTCTGCAATGCCACCAACTGTTTCTGCTCTTCTGCCAGCTGCTTCTGCAGATCCTTGA TCAATTGACGCAGCTCGCTCACAGCCCCCGATTCGCCACTGCCTTCAGTGTCGGTGGATTGCGCCTGGCTACCCGCCGACACCTTCATGCTGTCACTGCT GATGCTCAACGGCCCCACCGCCTCACCGGCCTGTTTCGCCTGTTCACGCTCGGTTGCTGCATTCGCGCTCAGCGTCTGTGCTGAAACACCATTGATCATC AGGTTGCTTGCCGTGATGCCGCTCATGTCGATTCCCTGCCTGAAGGATTGGTCCTTGCCGTAACCAACACATCGGCCGCCTCACGCTGTTCTTTAGCCCG CTTAAATTCCCCCTCGGCTGGCTCGTTCCAACTCATGTACTTGCGCAGGAGCCGGAGCCCCGGCGGGCGTCCATATTCGACCATTCAGGGAATCGCAGCC
|
|
| DNA Sequence for Gene |
>PPUBIRD1_1985
ATGAGCCAGTCCTCACAGCAGGAAACCATCAAAGACATGATCGGCGTGGGCTTCGGCCCCTCCAACCTGGCCTTGGCCATCGCCCTGGAAGAGCTCGCCG AATCCCGGGGCCATGCGCTCGACGCACTGTTCATCGACAAGCAGCAAGACTACCACTGGCACGGCGAGACCTTGGCTACCCAGAGCGAGTTGCAGATCTC GTTCCTCAAGGACCTGGTGTCGCTGCGCACCCCGACCAGCCCGTACAGCTTCGTCAACTACCTGCACCAGAAGCAGCGCCTGGCCGACTTCATCAACCTC GGCACCTTCTACCCCTGCCGCCTGGAGTACAACGACTACCTGCGCTGGGCCGCCGAGCATTTCACCTCTCAGGCGGTGTATGGGCAGGAAGTGTTGCGCA TCGAACCGCACCTGCATGCAGGCCGGGTCCAACACCTGTGCGTGATCACGCGTGACAGACAAGGCCGCGAATACAGCCGCCCCACCCGCTCGGTGGTGGT GGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGAGGGTCTTCCACCACTCGCAGTACCTGAGCAGCCTGACCAAA CTGCCGTGCACGGCTGGCAAACCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAG TCAAGGTCGACATGATTCTGCGCGGCTCGGCTCTCAAGCCCGCCGACGACAGCCCCTTCGTCAATGAGATCTTCTCGCCCGACTACACCGACCTGGTCTA CAACGAACCGGCCGACCAGCGCAGCAAACTGCTAGGCGAATACCACAACACCAACTACTCGGTGGTAGACCTCAACCTTATCGAGCGCATCTACGGCATC CTCTACCGGCAGAAGGTTGCCCATCAGCACCGCCACAACGTGCTGTGCCGGCGCCAGGTGGAAGCTGTGGTGGCCACCCGCGAAGGCCTGGAACTGACCC TGCGTGACCTCGCCACCGGCCAGCAGCAAACCCACCGCTACGATGCCGTTATCCTCGCCACCGGCTACGAGCGCCGCTCGCACCGTGAATTGCTGGCGCC GCTGGCCGATTACCTGGAGGACTTCAGCGTCGACCGCAACTACCGCGTACTGGCCAGCCCCGACCTGCAAGCCTCGGTGTACCTGCAGGGCTTCTGCGAA AACAGCCACGGCCTGAGTGACACCCTGCTTTCGGTCCTGCCAACCCGCGCTGCGGAAATTGGCCGAGCGCTGTACCAGGATCTGGAGCAGCTGCACGAAA AACCCCAAGCAGCAGTGGCGCTAACCCGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCCTCTGCAACCCGCCATCAAGGCCGGACTGATGCCTCGTGCGCAGTCCGGTTTTTGTGCTTTGAAACATTTGGTTTCATTTTAACCTGCAGGTTTTCA ATTCTCATTCGTCCTTATCAGTACAGCACTCTTTGGTTGGCACACGCTCGACCACCAATAGCAGAAGACCGTCTGATGGCCAAATCACCGAAAAAATCCA AATCCAGGCTGTGGTTCCTGGTCCACAGCTGGCTCGCCTTGCCGATCTGGTTCTTTGTCCTGATCGTCTGTTTCACCGGCATGCTCGCCGTGGTCAGTCA GGAAATCGTCTGGCTCGCCGATCCGGCCGTGCGCGCCAACAAGCCAGACGCGAACACCGAGCGCATGAGCTTTCAGCAGGTACTGGAGGCCTTGAACAAG GCCGAGCCGGACATGGTGGTGGAGCGCCTGAGCCAGCCGGATGGTTCGCACTTCGCGGTAAAAGCTAATGTAACCCTGCCTGATGGCACCAGCCCGACGC
|
|
| Amino Acid Sequence |
>L-ornithine N5-oxygenase
MSQSSQQETIKDMIGVGFGPSNLALAIALEELAESRGHALDALFIDKQQDYHWHGETLATQSELQISFLKDLVSLRTPTSPYSFVNYLHQKQRLADFINL GTFYPCRLEYNDYLRWAAEHFTSQAVYGQEVLRIEPHLHAGRVQHLCVITRDRQGREYSRPTRSVVVGSGGTPKIPENFGAFKDDPRVFHHSQYLSSLTK LPCTAGKPMRIAVIGSGQSAAEAFIDLNDSYPSVKVDMILRGSALKPADDSPFVNEIFSPDYTDLVYNEPADQRSKLLGEYHNTNYSVVDLNLIERIYGI LYRQKVAHQHRHNVLCRRQVEAVVATREGLELTLRDLATGQQQTHRYDAVILATGYERRSHRELLAPLADYLEDFSVDRNYRVLASPDLQASVYLQGFCE NSHGLSDTLLSVLPTRAAEIGRALYQDLEQLHEKPQAAVALTRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|