Pseudomonas putida BIRD-1, PPUBIRD1_1712 (chrR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida BIRD-1 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CGAGGCGACCCGCTCGATCCTTGATTACCTGGCATTCGCCCGAGCATTCAACCAGGGCTTTCCCGGCTTTGTCGCCGATGTGCACGGCCTGCAGCACGAA GGGGGCCGCTACACGGTGGATTGCATCACGGAATGCGCGTGATCTCGACGCCGGAACGTGCCAGCTCGAAACGGTTTTCACCCAGGTGGTTGACCTTGTC GCCGATGGCCAGGCGGTAGGTGGTGATGGGGGCGCCCAGCGTGCTGCCGTCGAGTTGCAGGGTGGATTCCTGAAACTCGTGCACGGGGTAGATGCGGCCT TCGGCGTCACGGGCGTGGAATTGGCCGACCATTACTGCTGCCATTTGGGTGGAAACCTCTGAATTACGTAGGAAATGTATGAAGGCATAGACCGTGAAAC AGATGCGGAAGTTTTCGCCCTGCGGAAAAAAAACTCAGGCGCCGGAGAACGGTCATCTATAACTACAACGTCTAATTAACCCGCAAAGGTTGGAATTGCC
DNA Sequence for Gene
>PPUBIRD1_1712 |chrR
ATGAGCCAGGTGTATTCGGTAGCAGTCGTCGTGGGCAGCTTGCGCAAGGAGTCCTACAACCGCAAGGTCGCCCGCGCACTTTCGGAGCTGGCGCCGTCCA GCCTTGCGCTGAAGATCGTCGAGATTGGCGACCTGCCGCTGTACAACGAAGATATCGAAGCCGAGGCACCGCCGGAAACCTGGAAGCGTTTTCGCGATGA GATCCGCCGCAGTGATGCAGTGCTGTTCGTCACCCCGGAATACAACCGCTCGGTGCCGGGCTGCCTGAAAAATGCCATTGATGTGGGTTCGCGTCCTTAC GGGCAAAGTGCCTGGAGCGGCAAGCCGACGGCGGTGGTGAGTGTGTCGCCGGGGGCGATTGGTGGCTTTGGCGCCAACCATGCGGTGCGCCAGTCGCTGG TGTTTCTCGACATGCCCTGCATGCAGATGCCCGAGGCTTACCTTGGCGGTGCGGCGAGCTTGTTCGAGGATTCGGGCAAGCTCAACGATAAGACGCGACC GTTCTTGCAGGCGTTTGTCGACAAGTTTGCTTCATGGGTGAAGTTGAACAGGGCGGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCCCGAATCATGCTGTGCAGCGCCCCCCCCCGCAGGAGCGGGTTTACCCGCGAATGCGTCATTGACTTTGCCGACGCATTCGCGGGTAAACCCGCTCCT ACCCGTCAGCGGAAGCTGTAGGATACCCCCGCATATACGCCAAACCCTTCGCCCGGTGTCGAACGGGCATTGTCCTTGCCTGCGTCGTTGTAGGCCGGCG TCACGGTCGCTGCATAGCGCTGGTTGGTCAGGTTGCGCAGGTCCAGCCAGGTCTGCCAGTCCTGTTTCGGTGAGTCCCAGCCAACGCGTGCGCCGAGCAA GGCATATTCATCGGCGTGGTAGCTATTGGCGTAGTCCACCTGCACCTTCGAAGCCATTTGTGTGTTGACCCCGGCATAGAAGCCGCTCGGCCAGTCATAG CGCAGCTCGGCCTGGTAGTAGTGCATGGGGATGCCGGGCAGACGGTTGTCGCCAAACGTGTCGTCATCACGGTAGTGGAAGTCGCTGAAGGTGTAGGCCT
Amino Acid Sequence
>ChrR
MSQVYSVAVVVGSLRKESYNRKVARALSELAPSSLALKIVEIGDLPLYNEDIEAEAPPETWKRFRDEIRRSDAVLFVTPEYNRSVPGCLKNAIDVGSRPY GQSAWSGKPTAVVSVSPGAIGGFGANHAVRQSLVFLDMPCMQMPEAYLGGAASLFEDSGKLNDKTRPFLQAFVDKFASWVKLNRAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site