Pseudomonas putida BIRD-1, PPUBIRD1_1118

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0003333 amino acid transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039085
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015424 ATPase-coupled amino acid transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039085
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppb02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppb02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 227 5.2E-75
PIRSF PIRSF039085 ABC_ATPase_HisP IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type 1 243 1.6E-101
FunFam G3DSA:3.40.50.300:FF:000020 Amino acid ABC transporter ATP-binding component - - 1 242 6.9E-118
CDD cd03262 ABC_HisP_GlnQ - - 2 214 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 242 6.2E-75
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 26 213 1.3E-17
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 17 165 1.1E-34
PANTHER PTHR43166 AMINO ACID IMPORT ATP-BINDING PROTEIN - - 2 240 7.4E-86

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.