Pseudomonas sp. BRG-100, JH25_RS04625 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. BRG-100 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATGGAAGTCAATTTCGAGTACATCAATTCGGAAGTGAACCCGGCCATGGCCAACATCGTCGGCCCCAGCGAGGCGATTGTGGTGTCGACCTTCCACATC GAACTCGATGGCGGTGGCGGTGACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTGCGCGAAATGCTCGACGCCGGTTTCCAGTCCGACCTCG ACGATCAGGACGAGCGCTGGGTCAAGGCCCTGCGCGAAGACCTGCTGGATGTCGACGTGCCCCTGAGCGCCACCGTGGCCCGTCGGCAGTTGCGCCTGCG CGATATTTTGCACATGCAGCCCGGGGATGTGATCCCTGTCGACCTGCCGGAAGAACTGATCATGCGCGCCAATGGCGTGCCGTCGTTCAAGGTCAAGCTC GGTTCCCACAAAGGCAACCTGGCGTTGCAAGTGGTTGAGCCGATCAACCGACGCTGATTCAACCCTAATTCATGATTGTTTGCTGCGCCGAGGACATGTA
DNA Sequence for Gene
>JH25_RS04625 |fliN
ATGGCTACCGAACACGAAAACACTTCCGCCGAAGACCAGGCCCTGGCTGACGAGTGGGCCGCGGCCCTGGAAGAAACCGGCGATGTTGGCCAGGACGACA TCGACGCACTGCTGGCCGCCGACGCCGCCACTGCGCCTGCCGGCAAGCGCCTGCCGATGGAAGAATTTGGCAGCGTGCCGAAGAACAACGAGCCGGTGAC CCTCGACGGTCCGAACCTGGATGTGATTCTTGACATCCCCGTGTCGATTTCCATGGAAGTGGGCAGCACCGAAATCAATATCCGCAACCTGCTGCAACTC AACCAAGGCTCGGTGATCGAGTTGGACCGCCTGGCCGGTGAGCCACTGGACGTGCTGGTCAACGGCACGCTGATCGCCCACGGCGAAGTGGTGGTGGTCA ATGAGAAGTTCGGCATCCGCCTGACGGACGTGATCAGCCCGAGCGAACGCATCAAGAAGTTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATGAAGTACTCGATGGCGGGACTGTTGCTGGCGCTGCCATTGAGCGCCTGGGCGGTGGAGCCGGTCGCGCAAGCGGCTGCGGCACCGGTGGTCGGCAGC GTCGGCGGGCAATTGACGCAGCTGGTGCTGGGCCTGTTGCTGGTGATCGGCTTGATCTTTGTGCTGGCCTGGCTGATGCGCCGCGTACAGCGCATCGGCC CGGGCAATGGCCAGGTGATCGAGCTGGTCGGTTCGCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAAGTCGGCGAGGAGCAGATCCTGCTTGG CATCACCCCCGGACGCATCACCCCGCTGCATGTACTCAAGACTCCGGTGGACGCGGCCAAGACCGAGACCGCCACGCCAGAATTCGCCCAGCGCCTGATG GAGTTGCTGGGCAAGGATCAGAAGGATAAGAAGTAATGCGCGTTTTGCTGACGCTCATGCTGTTGCTGGCCGCGCCGCTGGCCCTGGGCGCCGACCCGTT
Amino Acid Sequence
>flagellar motor switch protein FliN
MATEHENTSAEDQALADEWAAALEETGDVGQDDIDALLAADAATAPAGKRLPMEEFGSVPKNNEPVTLDGPNLDVILDIPVSISMEVGSTEINIRNLLQL NQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site