Pseudomonas sp. BRG-100, JH25_RS0127310
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. BRG-100 scaffold00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCACCGGCCAGCGCAGTGAAGACGTGCTGTTCAGCCCCCAGCGCATGAGCCTCGGCGGCTCGGCGTCGATACGTGGCTACAAGGACAAGCAACTGACCGG CGACAGTGGCGGCTACTGGCGCAATGACCTGCGCTGGAGCCGCCCGGTGACCCTCGGTTGGCTGCGCCCGGTGTTCGGTGAATACGGTGCCAGCGTGGGC TACGACCAGGGCGTGATCCGCAACGGTCGCTACAACGGCGAAGTGCACGGCCGCGTCTCAAGCAACTCGCTTGAGCTGTTCGCCCGCGGCAAACACGTCA GTACCAGCGTGACCTTTGCCCACTCGCTGGAACGACCGGCCGCGCTATTTGAGCGTGAAGCACCGATCTACTTCCGCATGGATTTCTTCCTGTAATTCAA CGCCCAGTTGCAACGAGAATTTGAAATGGATGTTCGCCAATTTGCCTTCCTGGTTCGCCAGCCTTCTGCTGCCCTGAAAAGCCGTGACGCGTTCCTCGGC
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| DNA Sequence for Gene |
>JH25_RS0127310
CTGCCCAAACGTGGCTTGGCGCTGATCCTGGCCAATGCGCTGTTCTGGCAACCGCTGCTGGCCCAGGCCGAAGGCATCGTGGTCAGCGCCCCCGGCACCA CAGTGGGCGCGGCGGGCAATGGCGTGCCGGTAGTGAACATCGCCACCCCCAATGGCAGTGGCTTGTCCCACAACCAGTTCAAGGACTACAACGTCGGCAC CAACGGCGTGATCCTCAACAACGCCACCGAACGCACTCAATCGACGCAACTGGGCGGCATCATCCTGGGCAACCCGAACCTGCAGGGCCGCGCTGCCAAT ATCATCCTCAACGAAGTCAACGGTGGCAGCCCGAGCCAATTGCGCGGCTACACCGAAGTGGCGGGCCAGTCGGCCAAGGTCATCGTCGCCAACCCCTACG GCATCACCTGCAGTGGCTGCGGCTTCATCAACACCCCCAACGTTACCCTGACCACTGGCAAACCCATCCTCGATAACGGCCGCCTGGACCGCTACCAGGT CGATGGCGGTGCGGTGACCATCGACGGCCAGGGCTTGAACGCCAGCAACGTCGACCGCTTCGAAATCATCACCCGCTCGGCCAAGATCAATGCGCAGATC AATGCGCGCAACTTGAGCGTGGTTGCTGGGCGCAATGATGTAAATGCGCAGACCTTGAACGCCACCACCCGCGCCGATGACGGCAGTGCCAAGCCGGAGC TGGCGATTGACTCGACGGCGTTGGGTGGGATGTATGCCGGGGCGATCAAGCTGGTGGGGACTGAAGCCGGTGTGGGCGTTAAGCTCGACGGTGCGTTGAT GGCCAGTGGGGGGGATATTCAGCTCGATGCCAATGGACGCTTGAGCATGGCTAATGCCAAAGCCAGCGAAGCGGTGGTGGTCAAGGCCGGTCAATTAGAC GCTGCTGGGGCTGTGTATGCCGGCACGCGAATCGATCTGCAAACCACAGCGGGCCTGAACAACCAGAAAAGCCTGGCGGCCCGCGACAGTATCACCGTTA CCAGCGGTGGCACGGTGGTCAACAGCGGCATCATCGAAGCCGGTGTCAACGCTGATGAAAGCCGCAATGCCAATGGCGATGTCAGCCTGCACGCGGCGAA CCTGAGCAATAGCGGCAGCGTGGTTGCCAGCCGAACCCTCATCGCGACAGCCAACCAAACCTTGAACAATCAAGGTGGCACATTGAGCGGTATAGGCGCC GTGGTTAACGCCGGCCAACTCGACAACCGTGGCGGTCGTGTATTGGGGAAGGACTCGCTCAAGGTCACGGCCACCGGCCTGGATAACCGCACCAACGGTC TGCTGCACAGTGAAAACAGCACCGACGTTACGGTAACCGCTGCACTGGATAACCAGAGCGGTCGCGTAATCGGCCTCAAGAACCTGACGCTCAACGCCGG CCAACTGACTAACGATAACGGCCTGGTCGCCAGCCAGGCGCAGGCCCGTGTAACCGCCGGGCAATTGAGCAACCAGGCGGGTGAAATCTCTGCCGATCAG ACTACCGTGATCGCCACGACCCTGGACAACCGTTCAGGCAAATTGCTGGGCAGCAACCTCAACGTGACCGCCAGCGGTGCCATCGATAACCGCCTGGGGA TTTTCTCCGCCACCAGCCTGACGGCACAGGCGGCCAGCCTAGATAACCGCGACAAAGGTTCCATCGCCAGCCAGGGCGTGATGAACCTGACCGTCGCCGG GCTGCTGGACAATCGCAATGAAGGCAACCTCGTCAGCCAGGGGGCTCATCAAATAACCGCAGGGCAGTTGAACAACAGCCAGGGCGGCCTGGTGTCCAGC AAAACTACCCTGGCGTTGCACGGCGACAGCCTGATCAACCAGGGTGGCCTGGTCATTGCCGACGGCGCGCTGACCCTCACCGGCGGCGATCTGGATAACA GCCAAGCGGGCGTGATCAGCACCAAGGCCGTAGCGCACGTGCAACTGAATCAGTTGAACAACAGCAACGGTGGCAAGTTGGGCAGCGATGGTGCGCTGAC CCTCAACGCCGACCGGCTCGAAAACAGCGCCGGTCGCATCAGCGCCAAGGGCGACTTGCAGGCAACGGTCGGTGTGCTCAATCAACAAGCGGGCGAACTC GTCAGCGACGGTGCGCTGAACCTGACCGGCACGTCCCTGGATAACCGCAACGGCGGCCTTATCGCTGCCACCAAGGGCGTGGACCTGCGCAGCCAGACCA TCCTTAACCAGCAAGGCGAGATATCCAGTCAGGCCAAGGTGCTGGTGGTCGCCGATCAACTGAACAACACCACCGGCAAGGTGATCGGCGACAGCGGCCT GACGCTCACGGTCCAACGCCTGCTCAACCAGAGCAAAGGCTTGCTGGCGGGGCGTGAGAGCCTTGTGTTGAACGGCGCCCAACTGGACAACAGCCAGGGT GGTCGTATCAGCAGCCAAAAAGACCTGAATATCACCCTGACCGGCGACCTGCTCAACCAAGGGCAGGGCACGCTGCTCAGCGAGGGCGCGTTAACCGTCA AGGCCGGTACGCTGGACAACAGCCAGGGCGGCATTTTGTCCGCAGCCAATGCGCTGTCGATCACCACTCAGGGCCAGTTGAACAACCAGGCAGGCAAACT ACTCGCCGATGGCACAGCCACGCTGGTCAGCGCTGCGCTGAACAACAGCCAGGGCGGTGTGATCAGCGCCAAGCAGCAGGTTGATGTGCGCAGTGCCGGC CTGAATAACAGCCAGCGCGGCAGTATCAGCAGTGACGCTGGTATCACCCTCAACGCAGGGCAACTGGACAACAGCCAACAAGGGTCGATCTTCGCCAAGT CAACGGTCAAGGCAACCCTGAGTGGGCTGGACCAGCATGACCGTGGTGAGCTGGTCAGCAACACCAACATCGAACTGGACTTGAACCATGGGCAACTGAT CAACCGCGACCACGGCCTGATCGCGACACCGGGCCAACTGCTGCTGAACAACCTGGGCAACGTCGACAACAGTCAGGGCGGTGAAATCTCCAGCACCCAG TCATTCCTGTTGATGGCCGATGCGCTGAACAACCGCGGCGGCAAAGTCATCAGTGGCGACAGCCTGCAGGTACGTATCGCCAAGGCGCTGGATAACAGCG TGGAAGGTGTACTGTCCGCCAAGAGCGTTCTGCAAGTGGCAGCCGACAGCCTGGACAACCAGGCCCGTGGCGCGCTCGCCAGCCGTGGTGCGCTGGACCT GAAGGTCACCGGTGTGCTGGATAACCATAACCAGGGGCAGATATCCGCCGCTACGGTTTTGACTACCACCTCAGGCTCCTTGAACAACAGCGACAAGGGC AGCCTCTCGGCCGGTGTGCTACAGACGCTCAACACCGGTGTGCTGGACAATCACCAGGGCGGACGAATCGTCAGCGACGGTAGCCAGACCGTCACTGCCG CCAATGTGGATAACCGCGCGGGTGTGATCGGCAGTCAACAGGCGCTGAACCTGACCACTGCCAACCTCGATAACACTGCCGGGTTGATCAACAGCCAGGC GGACCTGACCCTGACCGGGCAAACAGTCGACTCAAGCCAGGATGGGGAAATCTCAGCCAAGGGCGACTTGAATCTCATCGTTCAACAGCTGATCCAGCGT CAGGGCCGCTTGATCGGCGAACGCGCCGTAACCCTCGACCTGCAAGGCGGCAATCTCGATAACAGCGCAGGCTTGATCAGCGCCAAAGGCCCGCTGACCT TCGCGCGCCTGGCTAACCTGACCAACCGCGAACAAGGCGAAATCTCCAGTCAGACGGCGTTCACCGTAGCTGCCAAACGCATCGATAACGGTGATCGTGG GGTCATCCTCAGCGCTGATCAATTGCGTCTTGAAGCGGATACAGTGGTCAACGCCAACAAGGGCTTGATCTCCGGCTGGAACGGTCTGACGGTGGTCGGC AATAGCCTCGACAACAGCTCCGAGGGCACGTTGTCGAGCAAGAGTGGCACGTTGCACACCGACCTCACCGGTGTATTGGATAACCACGCGGCGGGTGCCC TGGTCAGCCTGGGCAAACAAACGCTCACCGCGGGCAGCCTGAACAATGATCAGGGGATCATCTCCGGCCAGGCCGATGTTGACCTCACCGTTGCCGGTCG CCTGGACAACGGCAACAGCGGCTTGATTTCTGCCGGTCAACAGCTGGACTTCAACAACGCCAAGAGTGAAATCCTCAACCGTGGCGGCCAGATCAGCGCG GCCAATATCTCCCTGACCGGTCAAAGCCTGGACAACAGCGGCGGGCAACTGATCAGCCAGGGCACCCTGGAAGGCACCCTCAGTGGTGCGCTGATCAACG CCAACAACGCCCGCCTGGCCAGTGGCGCAGCACTGTTGCTGAGCGCCGCCAGCCTGGACAACCGAGGGGGCCAACTGGTCAGCCAGGACCGCCTTGATCT GACCCTCGCCAATGGCGACCTGGATAACAGCGCCAAAGGCACACTCGCCAGCCAGAAAGACCTGGTGATCAGGCTGTTGGCCGGTGACGTTCACAACCAG CAAGACGGCCTGATGTTCAGCCAGAAGGGCAAGCTCGACCTTACCGCCCGCAGCCTCACCAACTATCAAGGCACGCTGCAAAGCCAGACCGATAACCGCC TGCGCCTCAGTGGCGCCCTGAATAACCAGGGCGGCCGCGTCGACAGCCTCAGTGGCAACCTGGACCTGGAAACCGCCAGCGTCGCCAATACCGCAGGTGG CATCCTCAACAGCAGCAAAGGCTGGATCAAACTGGTCACCGGCCTGTTCGATAACGGCAGCGGCATCACCCAGGCACAGTCGTTGAACATTGAAGCCAAA GGCGGCCTGCTCAACCAGTTGGGGCATCTGTCGGCCCTTGGCGGTGACAGCCAGATTGTCACCACCACCCTGAATAACCAGGGCGGCGGTGTGTATGCCG ACACCTTGCTCAAAGTCACGGCCGCGAACTTCGATAACCAGGGCACTGAGGTCGGTAATGGTGGCAAGGTCGGCGCCCGCGCAATTGATTTCGGCCTGAC GGGTACCCTGAGCAACAGCTATGGCCTGATTGAAAGCGACGACACCCTGCGCCTTGCCGCGCAAACCATCAACAACGTCAGCGGCAACCTGCGCGCCATG GGCCGGGTCGGCACCACCGATATTCGTACCACGGGCCTGTTCGATAACCGCTTCGGCGCGCTGGAAAGCGCCAACGAAACCCTCAACCTGCAAGCTGGCA GCCTGGACAACAACGGTGGGCGCATCGTGCATACCGGCACTGGCACGTTTGACCTGACCTCCGACCAGGTCACCCGTGCCGGTGGCAGCTTCGTCACCAA CGGCCAACTGGATATCAAGGCAGCAAGCTGGACTAACAGCAGTGTGATCCAGGCCGGACGACTGAACTTGGACATTGGCCAATTCACCCAGACCGCCAGC GGCCAATTGCTCGGCGCACAAAGCCTGACCGGCACCGGCGACACCTGGACCAACGACGGCCTGCTCGCCAGTGACGGCACCCTCAAGTTGACCCTCACCG GCGGCTATAGCGGTAACGGCCGGGTCAGTAGCCTGGGCGACATGACCCTCGCCGCCGCCAACATGGACCTGGGTGAGAATGCTCGTATTGGTGGTGGTGC AATCACCCAGGTCACGAGCACCAACGTCCTGACCAATCGTGGTCGCGTGACCTCGGTAGGCAACCTGACGGTCAACGCTGCCACCCTGAACAACTACGGC ACCCTGGGCGGCTCCGAGAATGTTCGCCTCAACGCCACGCATCTGCTCAATGAAAAAGGCCTGTTGTTCAGCGGCAAGGACATGACCTTGCGCGTCAACG ACTTCAGCAACCGCTTTGGTGATGTCTACAGCCTGGGTGGCCTCGACATCGCACGCGATGATGCCAACGGGCGCAGTGCACTGATTGAAAACGTCTCCGG TACCTTGGAAAGCGACGGCAACATGCGCTTGCTGACGGATACCCTGAGCAACCGACGCGACCAGTTCACCACGGAGAAAAGCCTGGTTTCCGGGAGCATC GGTGTCTACGGCAACGATTACTGCAAAGGTAAAGGCTGCGAACTGAGTTTCAGCGGTGTCGAAACCTATGAGGACGTCATCAAAGGCAGCTCCGCCTCCG CGTTCATCAATACCGGTGGTGATCTCACGGTAGGCAGCCAGACGTTCGATAACCTCTACAGCTCGGTATCGGCCGCTAAAAACATCCTGATCAACACCGA CGTGCTGAACAACACCGGCGCTGCCGGCGGTGAGCAGCGTAATTTCGGTTACGCCTACTACACGCGTAACCGGTCGGCTTACTCATTGCTGATGAGCGAA GTCGAACAGTTCAACCGTAGCAACGATCCCAGCTCAAGTGACTATAAGCCGGGTCAGTACACGTTCGACCAGTTCATTGAGAAGACGAGGTTCTCGGATA CCTACTTCACATCACCTATCGACTACACCGTGCCCACCTCTGGCAGCGTGATCGCCCAAGCGGTGATCCAGGCAGCCAGATCGGTCACCGTTAACGCAAC CAAAGAAATCAACAACAGCGTCATCCGCCCGAACGCTACCAACATCGATACCCCGGCGGCCAACCGCAACACCAACTCCGACGTATTTGCCTCCACGGTA AAACCGGCAATCACCGCGCAACTTCCTCCGGACCTGGCCCAACGCCAAGTCAACCCGGTGACCTTACCCGGCTTCAGTTTGCCGACCAGCCAGAACGGCC TGTTCCGTCTCAGCGGCCAGGCAGCGAAAGGCGGCGCAGCGAGTAAAGCGGACACCGCCACCGGGGACTTTAGCGTCAACGGGCGTGTCATCACCGCCGC TGACCGCGAGAAAACCCTCGACTACACCGCCGTGCAAGAACGCGGTTTCAACCTCGACGGCCAGCCCGTCAGCGGCGCAGTCAACGGCCAGGGCCCGTTG GCTCTGGACAATCGCTCCCCCTCGATCACCCGCGTGCAAGGCCTGCCGGACATTACTCCGGTAGATAACAGCCACAAATACCTGATCGAAACCAACCCGG CGCTCACCGACCTCAAGCAGTTCATGAGCTCCGACTACCTGCTCGGCAAACTCGGCTATAACCCCGATGCCAGCTGGAAGCGCCTGGGCGACGGCCTGTA CGAGCAACGCCTGATCCGCGAAGCCGTGGTGGCCCGCACCGGCCAGCGCTACATCAACGGCATCGCCAGCGATGACCAACTGTTCCGCTACCTGATGGAC AACGCCATCTCCTACAAGGACTCACTCAACCTGCAACTGGGCGTATCCCTCACCGCCGAGCAAGTCGCGGCGCTGACCCACGACATCGTGTGGATGGAAG AAGCCGAGGTCAACGGCCAGAAAGTCCTGACCCCCGTGCTCTACCTGGCCCAGGCCAATAACCGCCTGGCCCCCAACGGCGCGCTGATCCAGGGCCAGGA CGTGAGCCTGATCACCGGCGGCGACCTGCACAACAGCGGCACCCTGCGTGCCACCAACAACCTGAACATGGTCGCGGGCAACATCGACAACAGCGGCCTG ATGCAAGCCGGCAACCGCCTGGAAATGCTCGCCACCGACTCGATCCGCAACAGCCGTGGCGGCATCATCAATGGCCGCGACATCAGCGCCACCGCCGTGA CCGGCGACATCATCAACGAGCGCACCGTCACCACCTTCAAACAGGACGGCCAGGGCTACCAACTGCGCAACGACGTGGCCAGCGAAGCCTCACGCTTCGA AGCCACCGACACGCTCAAGCTGAACGCCGGGCGCGATGTGCTCAACGTTGGCAGCAACCTCAAGGCCGGTGGCAACGCCAGCGTAACGGCAGGGCGTGAT GTGCTGATCGCCAGCCAGACCGAACAGGACGACTACGCCTACCAACGCCGCCGCATCAGCGGCACCGAGCAAACCATCCTGCAACACGCCTCCGCTGTGG ACGTGGGCGGCAACCTCGCCATCGACGCCCGCCGCGACATCGCCGTGGTCGCCAGCACCGTCAGCGCCGCCAAAGACCTCAGCGTCAAAGCCGGCGAAAA CCTGACCCTGGCCGCCGCCGCCAACGAACAACACGACTACTCCAAAGGCAAAAAAGGCGGCACCAAAACCACTACTCAACTGGACGACGTCACCCAACAA AGCGCCGAACTCAAAGCCGGCGGCGACCTGATCGCCATCGCCGGCACCGACCTGACTTTGGTTGCCAGCAAGATCAGCGCGGGTAACGAAGCCTATGTGC ACGCTGATAACGAATTGCAAATGTTGGCGGCGCAAGACAGTCATTACTCGCTGTATGACATGAGCAAGAAGGGCAGTTGGGGCAGCAAGAAGACTCAGCG TGATGAAGTGACCGATGTGAAGAATGTCGGGAGCGAGATCAAGACTGGGGGGGATTTGACGCTGGAGAGTGGAGGTGATCAGAAGTATCAGGCGGCGAAG CTTGAGAGTGGTGGGGATATTGCGATTGTCAGCGGTGGGGCGGTGACGTTTGAGGCGGTGAAGGATCTGCATCAGGAGAGTCATGAGAAGAGCAAAAGCG ATTTGGCGTGGAACAGTGCCAAGGGTAAGGGAAATACCGATGAAACTCTGCGTCAGACGGAAATGGTGGCCCAAGGTCAGTTAGCTATTCGGGCTGCTGG CAAGATTAATATAGATATTAGACAAGTTGATCAACAGACGGTTAGCCAAACAATCGATGCGATGGTTAAAGCGGAACCTAAATTAGCGTGGATTAAGCAA GCTGAAGCCAACGGGCAAGTCGATTGGCGAGTCGTGAAGGAAATTCATGACAGTTGGGATTACAAAAACTCCGGGCTGGGGGCCGCGCCTGCGCTGATTA TTTCAATCGTTGCTAGCTTTTACCTTGGGCCTCTTGCTGGAGCCATGGCGAGTAATTTTGCTGTAGGTACGATTAATGGCGGGGGAGATATTGGTGCAGG TTTTAAGGCTGCCACCAATAAGAATGCGATTAAGGGGTATGCGACACAGATGGTCACGAGCGGTATTTTGGCCGGTATAGATACTGCTGTCGCCGGCTGG AGTCCCGACGGACCATTAATCCTGAATGCCAATGGTGTCAACAATCCAGGCTATAGCTCAAGTATGCTGGATTGGAATACGGTTAGTGAGAACGTACTTC GAAGCAGTACGCATGCTTTGGTCGCAGGTAGCGTTAACACAGCGATCAACGGCGGTAGTTTAAAAGATAACCTCGGTACTGCTGCCATTTCGGAAGGCCT TGATCTCACCGCTGCTTTTGGAAATAAACAAGTCGGTGATTTGGCCGATTATTTGGATGTCAGCCCTGGCACAGCTTCGAAAATCTTCATGCATGCTGTG CTGGGTGGAGCACTTTCATCCGCTAGGGGCGGTGATTTTAAAACCGGAGCGCTGGCAGGCGCTGCTACGGAAGGATTGACGTCTGTTGCGGCAGAAAATC TTGGCAAATACCTAGATACACAGCTTTCTACGAATGGCCAGTTCAAAGTCGCCACCGCTCAGGTTATTGGGGTGTTGGCGGGGGCTTTGGGTAACGGTGA TCCCGAGACAGCCAGTTGGGTAGCGGGGAATGCCCAGCGCTACAACGATTTCCTACATATGGGGGGGAATTGGGGAGCTGCTGCATCCAGTCTCGGCGCT GAAATGATCGAGCAAGGCAAGACACCGGATCAGATCTCTGAGGCGTTCAGATCCTTGGCCAGAAGCGATGGGTATGAGGGGCCAGGCCATGATTATGTTG CTGGTTGGGTCTTGGTGCCTGGCGCCATTGGGCTAGGGGTTGCGTCAGCTGAACTGGCGATGGGCTGCGCACTTGCACCGGTGATGTGTAATCAGGCTGC GTTAGCCGTTGCAGAAGTGGCGGGCGGAGATGCTGCTCTCGGTGGTACGGCGCTTGGTGTGTTTGGCGGTGGGGCGTTGACGGTAGCTGGAGGTGCGGTT CAAGATGGGGGAGCTAAGGTAGTTCAATTATTGCCTGAGCTCTCAATCAGTGCGAAAAAAACTGCTTCATTTAGTGAGGCTAAAACGGTACTGGAGTCGG CCCAATTACCTTACAAAGGTTCCACCGTTATCGGTCATGCACTATCGAAGCACGCGGGTAGAAATCCTGATATTTGGGGTAAGACTACAGGGTCTATGGC TACTTGGAATGAGCAGGCTATGACGCAGTTACGTGAAATAATACGTGCTCCCGGCGAGTTCAAATCGGTGACAACAGATAAGGGAATTCCATTTATAGAG AAACGTCTTGGTGACGGGCGTGGCATACGGTTGAATCTAGATGGGACATTTAAAGGGTTTATCGACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTATGAAAGAATCATATGAGGTTGTTCTAGGTGGCGTGGTTAAAGAAGATATTATTGTTCTCCTGAAGGACCTCGAGAGTCATTCGGAGCGCGTTGACG ATGTGACAGCCTCAGAAGTACTCGGCATTGTGAGTTGCTTGGGCCTTGATCAAATTATGATTGCGGAGCTTTGTCATTTTGAAGGTGATGTTTGTGTGTC TGCTAAATTGTATGGTTTTGACATTGTATCTGCCTCCTCCGATTTTTTTGTGTTGCTTAGAGTTATAAAGTATGGGGAGGATGTTGATGTGGAATTGTGC TTTGATGATTCTATTTTTAGTGATGTTGATAAAGTCATGCTTCTGCTGCAGAAATATATAAAAGAGATTTCTGATAGAGTTCGTATGAAGGAGTATTACG GAGGGGTGGAGCCTGCCAAAGACTTAGAAACCCGATACTTTACTGGCGAAATGTTAGGCCCTCTGGTTACGCGTTTTCGCTGACAGGTGATAAGGGCTCT
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| Amino Acid Sequence |
>hemagglutinin
MPKRGLALILANALFWQPLLAQAEGIVVSAPGTTVGAAGNGVPVVNIATPNGSGLSHNQFKDYNVGTNGVILNNATERTQSTQLGGIILGNPNLQGRAAN IILNEVNGGSPSQLRGYTEVAGQSAKVIVANPYGITCSGCGFINTPNVTLTTGKPILDNGRLDRYQVDGGAVTIDGQGLNASNVDRFEIITRSAKINAQI NARNLSVVAGRNDVNAQTLNATTRADDGSAKPELAIDSTALGGMYAGAIKLVGTEAGVGVKLDGALMASGGDIQLDANGRLSMANAKASEAVVVKAGQLD AAGAVYAGTRIDLQTTAGLNNQKSLAARDSITVTSGGTVVNSGIIEAGVNADESRNANGDVSLHAANLSNSGSVVASRTLIATANQTLNNQGGTLSGIGA VVNAGQLDNRGGRVLGKDSLKVTATGLDNRTNGLLHSENSTDVTVTAALDNQSGRVIGLKNLTLNAGQLTNDNGLVASQAQARVTAGQLSNQAGEISADQ TTVIATTLDNRSGKLLGSNLNVTASGAIDNRLGIFSATSLTAQAASLDNRDKGSIASQGVMNLTVAGLLDNRNEGNLVSQGAHQITAGQLNNSQGGLVSS KTTLALHGDSLINQGGLVIADGALTLTGGDLDNSQAGVISTKAVAHVQLNQLNNSNGGKLGSDGALTLNADRLENSAGRISAKGDLQATVGVLNQQAGEL VSDGALNLTGTSLDNRNGGLIAATKGVDLRSQTILNQQGEISSQAKVLVVADQLNNTTGKVIGDSGLTLTVQRLLNQSKGLLAGRESLVLNGAQLDNSQG GRISSQKDLNITLTGDLLNQGQGTLLSEGALTVKAGTLDNSQGGILSAANALSITTQGQLNNQAGKLLADGTATLVSAALNNSQGGVISAKQQVDVRSAG LNNSQRGSISSDAGITLNAGQLDNSQQGSIFAKSTVKATLSGLDQHDRGELVSNTNIELDLNHGQLINRDHGLIATPGQLLLNNLGNVDNSQGGEISSTQ SFLLMADALNNRGGKVISGDSLQVRIAKALDNSVEGVLSAKSVLQVAADSLDNQARGALASRGALDLKVTGVLDNHNQGQISAATVLTTTSGSLNNSDKG SLSAGVLQTLNTGVLDNHQGGRIVSDGSQTVTAANVDNRAGVIGSQQALNLTTANLDNTAGLINSQADLTLTGQTVDSSQDGEISAKGDLNLIVQQLIQR QGRLIGERAVTLDLQGGNLDNSAGLISAKGPLTFARLANLTNREQGEISSQTAFTVAAKRIDNGDRGVILSADQLRLEADTVVNANKGLISGWNGLTVVG NSLDNSSEGTLSSKSGTLHTDLTGVLDNHAAGALVSLGKQTLTAGSLNNDQGIISGQADVDLTVAGRLDNGNSGLISAGQQLDFNNAKSEILNRGGQISA ANISLTGQSLDNSGGQLISQGTLEGTLSGALINANNARLASGAALLLSAASLDNRGGQLVSQDRLDLTLANGDLDNSAKGTLASQKDLVIRLLAGDVHNQ QDGLMFSQKGKLDLTARSLTNYQGTLQSQTDNRLRLSGALNNQGGRVDSLSGNLDLETASVANTAGGILNSSKGWIKLVTGLFDNGSGITQAQSLNIEAK GGLLNQLGHLSALGGDSQIVTTTLNNQGGGVYADTLLKVTAANFDNQGTEVGNGGKVGARAIDFGLTGTLSNSYGLIESDDTLRLAAQTINNVSGNLRAM GRVGTTDIRTTGLFDNRFGALESANETLNLQAGSLDNNGGRIVHTGTGTFDLTSDQVTRAGGSFVTNGQLDIKAASWTNSSVIQAGRLNLDIGQFTQTAS GQLLGAQSLTGTGDTWTNDGLLASDGTLKLTLTGGYSGNGRVSSLGDMTLAAANMDLGENARIGGGAITQVTSTNVLTNRGRVTSVGNLTVNAATLNNYG TLGGSENVRLNATHLLNEKGLLFSGKDMTLRVNDFSNRFGDVYSLGGLDIARDDANGRSALIENVSGTLESDGNMRLLTDTLSNRRDQFTTEKSLVSGSI GVYGNDYCKGKGCELSFSGVETYEDVIKGSSASAFINTGGDLTVGSQTFDNLYSSVSAAKNILINTDVLNNTGAAGGEQRNFGYAYYTRNRSAYSLLMSE VEQFNRSNDPSSSDYKPGQYTFDQFIEKTRFSDTYFTSPIDYTVPTSGSVIAQAVIQAARSVTVNATKEINNSVIRPNATNIDTPAANRNTNSDVFASTV KPAITAQLPPDLAQRQVNPVTLPGFSLPTSQNGLFRLSGQAAKGGAASKADTATGDFSVNGRVITAADREKTLDYTAVQERGFNLDGQPVSGAVNGQGPL ALDNRSPSITRVQGLPDITPVDNSHKYLIETNPALTDLKQFMSSDYLLGKLGYNPDASWKRLGDGLYEQRLIREAVVARTGQRYINGIASDDQLFRYLMD NAISYKDSLNLQLGVSLTAEQVAALTHDIVWMEEAEVNGQKVLTPVLYLAQANNRLAPNGALIQGQDVSLITGGDLHNSGTLRATNNLNMVAGNIDNSGL MQAGNRLEMLATDSIRNSRGGIINGRDISATAVTGDIINERTVTTFKQDGQGYQLRNDVASEASRFEATDTLKLNAGRDVLNVGSNLKAGGNASVTAGRD VLIASQTEQDDYAYQRRRISGTEQTILQHASAVDVGGNLAIDARRDIAVVASTVSAAKDLSVKAGENLTLAAAANEQHDYSKGKKGGTKTTTQLDDVTQQ SAELKAGGDLIAIAGTDLTLVASKISAGNEAYVHADNELQMLAAQDSHYSLYDMSKKGSWGSKKTQRDEVTDVKNVGSEIKTGGDLTLESGGDQKYQAAK LESGGDIAIVSGGAVTFEAVKDLHQESHEKSKSDLAWNSAKGKGNTDETLRQTEMVAQGQLAIRAAGKINIDIRQVDQQTVSQTIDAMVKAEPKLAWIKQ AEANGQVDWRVVKEIHDSWDYKNSGLGAAPALIISIVASFYLGPLAGAMASNFAVGTINGGGDIGAGFKAATNKNAIKGYATQMVTSGILAGIDTAVAGW SPDGPLILNANGVNNPGYSSSMLDWNTVSENVLRSSTHALVAGSVNTAINGGSLKDNLGTAAISEGLDLTAAFGNKQVGDLADYLDVSPGTASKIFMHAV LGGALSSARGGDFKTGALAGAATEGLTSVAAENLGKYLDTQLSTNGQFKVATAQVIGVLAGALGNGDPETASWVAGNAQRYNDFLHMGGNWGAAASSLGA EMIEQGKTPDQISEAFRSLARSDGYEGPGHDYVAGWVLVPGAIGLGVASAELAMGCALAPVMCNQAALAVAEVAGGDAALGGTALGVFGGGALTVAGGAV QDGGAKVVQLLPELSISAKKTASFSEAKTVLESAQLPYKGSTVIGHALSKHAGRNPDIWGKTTGSMATWNEQAMTQLREIIRAPGEFKSVTTDKGIPFIE KRLGDGRGIRLNLDGTFKGFID
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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