Pseudomonas sp. BRG-100, JH25_RS08105
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. BRG-100 scaffold00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACATGGACAGCCTGCGCCGCAAATCCCTGGCATTGACCGACCTGTTTATCGCGTTGGTCGAAAGCCGCTGCGACGCCCATGGCCTGGAACTGATCACGC CGCGTGAGCACGCCCGGCGCGGCAGCCATGTGAGCTTCGAACACCCCGAAGGTTACGCGGTGATCCAGGCCCTGATCGCCCGAGGCGTGATCGGCGATTA CCGTGAGCCGCGGATCATGCGCTTTGGTTTCACGCCGCTGTACACAAGCTTTACCGAGGTGTGGGACGCCGTGGAAATCCTCGGTGAAATTCTCGACAAC TGCACCTGGGACCAGCCGCAATTCAAAGTCCGAAACAGCGTTACTTAATAGCACCACAGACCCAATGTGGGAGGGGCTTGCTCCCGATAGCGGTGTGTCA GTTGACATATCAGTGACTGACACACTGCTATCGGGAGCAAGCCCCCTCCCACAGGATTCACCGCCAGCAGCAACCATCACAATAATAAAGGGGCACTCCA
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| DNA Sequence for Gene |
>JH25_RS08105
GTGACCACGCCAGACAACGGCTTTGCAGAAATCACCCACCGCGAACTGGGCCTCAGGCGCCAGCTCACTTCCGGCCAGATGAGCATGATCGCTATCGGTG GCGCCATCGGCACCGGGCTGTTCATGGGCAGCGCCTACGCCATCGGCTATGCCGGGCCCAGCGTGCTGGTGAGCTATGCCATCGGCGCCTTGATCACCTT GCTGCTGATGGGCTGCCTGGCAGAGATGACGGTGGCTCATTCCACCTCTGGCTCCTTTGGCGCCTATGCCGAGTTCTACATCAGCCCGTTGGCCGGGTTC CTGGTGCGGTATGCCTATTGGGCGGCGATTGTGCTGGCGGTGGGCGCGGAGGTCACGGCGGTGGCGATGTATATGAAGTACTGGTTCGCCAATGTGCCGG AATGGGTATGGATCGTATCGTTTTCCAGTGTATTGATTGTGCTCAATGCGATCAGCGTGAAGACCTTCGGCAACTTCGAATACTGGTTCTCGACGATCAA GATCAGCGCCATTGTCGGCTTCATCATCCTGGCGGTGTATGTGGTGTTCGGTTCTGGCAACCCGCAGTACGGCGTGCAGAACTACACGGCCCACGACGGC TTTTTCCCCCATGGTTTGAGCGGCATGTGGATCGCGGTGATTGTGTCGATCTTCAGCTACCTCAGCGTCGAGATGATCGCCGTGGCCGCTGGTGAAGCGG CCGACCCGGAGCAGGCGGTGAAGAAAGCCTTTCGCGCAACCATCGTGCGGCTGGTGGTGTTCTACCTGCTGACCCTGGCGCTGATGCTTGCCATCGTGCC GTGGAACCAGGCTGGTCAGAGCCAGAGCCCGTTCGTGACGGTGATGCAGACCATCGGCATTCCGGGCGCCACCGGGGTGATGAATTTCGTGATTCTGATC GCAGCGCTGTCGGCGATGAACAGCCAGCTCTACATCACCACGCGCATGATGTTCAGCCTGTCGCGCGCAGGTTTTGCACCCAAGTCCATGGGCGCCTTGA GCAAGAATGGCATCCCGCTGAATGCCTTGTTGCTTTCCAGCTCGGGCATTGCCCTGGCGACCCTGCTGAATGTGGTGTACCCGGAAAGCTCATTCACCCT GATGATGGCGATCTCGATGTTTGGCGCGATCTTCACCTGGTTCATGATCTTCCTCACGCACCTGTTCTTTCGCCGCTATCGCAAGCGCCATGGCGGAGCG AAGTTGTCGTTCCAGCTGCGGTTTTTTCCCTACAGTACGCTGCTGGGGTTGGTGCTGATGGGGGCGGTAATGATCACCACCTATTTCACCGAAGCGTTCA AGATGACCTTGGTATTCGGCGTGCCGTTCCTGTTGATTCTGTCGGCGGTGTATTACGGGTTCTTCCGCAAGGGCAGGGCCAAGGCGTCGAACAAAGCCCT GGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGGCAGTTGCTCGAACGAGCGTGCGCATAACAGCAACGAGCGACAGGCCCACTCCTCTTGCAGGGGGTGGGCCTTGAAACGGCGTTCTGACGGCCAGC GCTCCAAGGCTGCCTGCGGCACGATGCCCAGACCCGCGCCGCCGGCGACCATGCGAATCAACCCATTAAAACCGTCGGCGCGAATGCGTGTCTGCAAGCG AAAGCCTGTGTGCAGTGCCTGTTCTTCCAGATAAACCGCCAGCGCGCTGTTGGCCGCCAGGCCCACGTAGTCGTATTGCAAGCTGTCGATAAAACTCGGG CGGGTCAACGGGTGGTCCAGGGGCATGATCAGCACCAGCGGATCATCGCGAAACGCCAGGGTCTGCAAGCCGTGGGTGTCCACGGCATCGGAAATAATCC CCAGGTCGGCGGTGCCCTGGCGCAAGGCTTGGGTGATGCGCAGGCTGGGCAATTCTTGCAAGTCGATATCGAGATTGGGGTGCTCGCACAGAAAGTGTGC
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| Amino Acid Sequence |
>amino acid permease
MTTPDNGFAEITHRELGLRRQLTSGQMSMIAIGGAIGTGLFMGSAYAIGYAGPSVLVSYAIGALITLLLMGCLAEMTVAHSTSGSFGAYAEFYISPLAGF LVRYAYWAAIVLAVGAEVTAVAMYMKYWFANVPEWVWIVSFSSVLIVLNAISVKTFGNFEYWFSTIKISAIVGFIILAVYVVFGSGNPQYGVQNYTAHDG FFPHGLSGMWIAVIVSIFSYLSVEMIAVAAGEAADPEQAVKKAFRATIVRLVVFYLLTLALMLAIVPWNQAGQSQSPFVTVMQTIGIPGATGVMNFVILI AALSAMNSQLYITTRMMFSLSRAGFAPKSMGALSKNGIPLNALLLSSSGIALATLLNVVYPESSFTLMMAISMFGAIFTWFMIFLTHLFFRRYRKRHGGA KLSFQLRFFPYSTLLGLVLMGAVMITTYFTEAFKMTLVFGVPFLLILSAVYYGFFRKGRAKASNKALA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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