Pseudomonas sp. BRG-100, JH25_RS10975

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. BRG-100 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGGCATCGCAGCGCCGAGTTGGCGTTGCCCCGCTTGTCGCTGCCGCTGTACCCGCTCAAGGGCTACAGCCTGAGCGTGCCGATCGGCGCGCAGCACAAG GCGCCGAACGTGAGCATCACCGACTATGACCGCAAGATCGTCTACGCGCGCATTGGTGAGCAACTGCGGATCGCGGCCATGGTGGATATTGTCGGCTTTG ATGCGCGTCTTGAGCCCAAGCGCCTGGCCTTGATAAAGCGCCAGGCGCTGGAGACGTTTCCCTTGGCCGGTGACTACGCCCACGCGGTCGAGTGGGCCGG TATGCGCCCGGCAACACCGACGGGCGTACCATTGATCGGTGCCAGCGCCTACCGCAATTTGTGGTTGAACCTGGGGCATGGCGCGCTTGGTTTTACCCTG GCCTGTGGCAGTGGCCAGCTATTGGCTGAGTTGATCAGCCAGCATGTTCCTTCCATTGATATGCAGGGCCTGGCGCCCCGCGCCGCTTGAGGATGCAGCC
DNA Sequence for Gene
>JH25_RS10975
ATGACTATCACCCGAATCAACAGCAACGAGCGTCTTAGCGCTGCCGTGACCTTCAAGGATTTGGTGTTTCTCTCGGGCCAGGTACCGGGCGATGGCCAGG ACGTAGGCAGCCAAACCCGAGAAGTGTTGGCCAGGATCGACGCGCTGTTGGCCGAGGCGGGCAGTGACAAGGATCACCTGCTCAACGCGACGATTTACCT GAAGGACATCAGTACCGGTTTTACGCCGATGAATGAAGCCTGGTCTGCATGGCTTTCGCCAGGCATGGCGCCCACGCGTACCACCCTGCAAGCAGAGCTG GCGCGACCGAGTGTCCTGGTGGAAATCAGCGTGATTGCAGTACGTAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGATCTACCAACGGAGAATAACAATGAAAAAAATCCTGTTGACCGGCTGCGCTCTTGGACTTTTTTTGAGCGCAAACGCCCATGCGACCGAAGCGCCTC TGGAGGGCACCTTGAGCAAGATCGCCAGCGCCAAGGCCATCACCCTGGGGTATCGCGATGCGTCGGTGCCGTTTTCCTACATTGGGGATAACAGTGGCAA ACCGATGGGCTACTCGGTGGACCTGGCGAGCAAGATTGTCGAGCGCATCCAGCAGAAAATCGGGGTGAGTGAGCTCAAGGTGAAGTACAACCTGGTGACT TCTCAAACCCGTATTCCGCTGGTGCAGAACGGCACCGTCGACCTGGAGTGCGGCTCCACCGGCGTGACCGCCGAGCGGCAGAAGCAGGTAGCATTTTCCT ACGGGTTCATTTACGTGAAGGGGCAGTTGCTAACGGCCAAGGACAGCGGGATCAAAGGCTTTGCCGACCTCAAGGGCAAGAACGTGGTGACCACTGCCGG
Amino Acid Sequence
>endoribonuclease L-PSP
MTITRINSNERLSAAVTFKDLVFLSGQVPGDGQDVGSQTREVLARIDALLAEAGSDKDHLLNATIYLKDISTGFTPMNEAWSAWLSPGMAPTRTTLQAEL ARPSVLVEISVIAVRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site