Pseudomonas sp. BRG-100, JH25_RS21190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. BRG-100 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TATTCGTTCTGGATATGGGAGAGCCAGTGAAGATTGTCGAGCTGGCCGAAAAAATGATTCACCTATCCGGCTTGAGTGTGCGTTCTGAGAAGAATCCCCA CGGTGATATTGCCATCGAATTCTCTGGCCTACGTCCCGGTGAAAAGCTTTACGAAGAGTTGCTGATTGGTGACAACGTCGTTGCTACCCAGCACCCGATG ATCATGAGTGCCAATGAAGATCATCTCTCATGGGAAGCGCTCAAAGGCAAGCTCACTGAGTTGCTTGCTGCGGTTGATGAAGACGACTACACCCGTGTCC GCCAGCTTCTGCGCGATACCGTTAGCGGCTATTCCCCCGATGGCGAAATCGTCGACTGGATCTACCAGCAGCGGCGCTTGGAGCCGTGAGTTAACACCCT GTTACTCACCCATTTTTGACACCCTCCACCCATCGCCTAACGTAGAAAAGCAGCTTCGGAAAAGCTGCTTTTCTCTTACCGATGTCATGGAGCGTCACCA
DNA Sequence for Gene
>JH25_RS21190
ATGCAAAACCTCTACATTTCGTCTCTTGTCTTCGCCTTCCTCACCTCCCTCTCCGTCGCCACCACCGCTGCGCCTCCCATCAAGCCGGAAGCTTCAAGCC CAATCTCCACCCAAATGACCAAGATCGAGCAATCCACCAAGGTCAATCTCAACGCCGCCGATGCCGAGACCCTGCGCCGCGACCTGTTCGGTATCGGCGC TTCCAAGGCGAAGGCAATCGTTGCGTATCGCGAAAGCAACGGTCCGTTCACAGCGGTGGATGAGTTACTGGAAGTAAAAGGCATCGGTAAAGCACTGCTG GAGAAGAATCGCGACAGATTGGTTATTAATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGATGCGAAGATAGCCCCAGAAGGCCGGTCATTGACCGGCCTTTCCTTTATCAAAGCTGCGTCTATTTACTCTCAGGCCGCGTTGGCATGAAACGTGATT ACATTCAACTCAACGATTGTTCAACAATCTTGAGGTGTACATGACGTCCAGCTTGTCTTTAGCCGACCAAATCGCCCTGGAATTACGCGCCGACATTATC GGCGGGCGGCTGCTGCCGGGTGTGTCGCTCGTCGAGGCCGACTTAGTCAAGGGCTACAACGCCTCGCGCAATACTATCCGTGAGGCGCTGCATCGCTTGG GCCAAGAAGGGCTTACCCGCTATGTCCGCAATAAGGGCGTAATGGTTCGGCGCCTGCAGCGGGCAGAAGTACGTGACCTCTTCGTAGTCCGCCGCACCCT GCAATTGCAGGCCATAGCCCAAAGCGGCCCGCTGACGGACACTCAATCAGGCCGCATGCAAAACGCTATCGACGCCACCACCCTGGCCCGGGAGCGCGAA
Amino Acid Sequence
>competence protein ComEA
MQNLYISSLVFAFLTSLSVATTAAPPIKPEASSPISTQMTKIEQSTKVNLNAADAETLRRDLFGIGASKAKAIVAYRESNGPFTAVDELLEVKGIGKALL EKNRDRLVIN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site