Pseudomonas sp. BRG-100, JH25_RS24555
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. BRG-100 scaffold00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTTTTGAATGACTCATTTTCGGCCGCACACAACCATCCAAGGCAAAATAGGCAAACTTAACGCCATTAAAGTACGTATCAGAGAGCCCTTAAGTTCCGT TCAAACATATCGAGACACAAGAACCTTAGCCATGCATAAAGCAATGAGCAAGCGACGGACCAAAACTTAAGAAACATCCTACGCGCCGCTATAATCTTGG CCTGCGCAGCTATTTGCGCACACATTCGAGTAACAACAACTCTGTTAGCTCGGCCAGCCGTATACTTCACCGTAAAAACACGTGAGCAACTAAGTGCGCA TCGATGCGCAACTTTTATAACTAAAAACAGCCCATAGCCCGGAATAAAAACCCAATACGCAGCGCACCAAACAGTGCTCACCCTTATTTCATTGAACTTC ACACTTTCAGGCACGCTTCTTGTTATAGGTTATAGGCACCTACCCGTTCAGCCATTTCGCTGTTCGGCAAAACCTACTCAACCCGGCAAGGAAACCAATC
|
|
| DNA Sequence for Gene |
>JH25_RS24555
ATGCCAACACCCGCGTACCTCTCCATCACCGGAGTCAAACAAGGTTTGATCACGGCAGGCACATTTACTCAGGACTCGGTAGGCAACATTTATCAGGAAG GTCATGAGGATCAGATACTGGTCCAGGCATTTGCCCATCAGGTGATCATTCCTCGCGATCCGCAATCGGGCCAGCCGACAGGTCAGCGCGTGCACAAGCC GCTGATGATCAGCAAGGTTTTCGATAAATCGTCACCGTTGCTGTTCAGCGCCCTGACCAGCGGTGAAGAAGTCTCCTGCCGCCTCGAATGGCTGCGCACC TCGTCCGCCGGAACCCAGGAGCACTACTTCACCATTGAACTGGAGGGTGCGACTATCGTGGACATCCAGTCACGCATGCCCAACTGCCAGGACCCCGACA ACGCCCACTTCACTCATCTGGAGGATGTGCACTTCACCTATCGCAAAATCATCTGGACTCACGAAGTGGCCGGAACTTCCGGCTCGGACGACTGGCGCAG CCCAGTGGCCGGCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCACGGCTAGAGCGGGAACAGCTGCCAGGGAAGGCGCCGTTCCTGCTGGCCGGTTACACCATCGCCAATGGGTGCTTACGCTTGGGCGCTGCGAACACAC GATCGATAGCGTCCAGGTCATGTTCATCCAACACCAGCTTCGCAGCTGCGGCGTTGAGTCGGATGTGTTCAGGTGTGACCGCCTTGGGGATTGCGATGAC ACCCTCCTGGCGCAGGACCCACGCCAGCGATACCTGGGCCGGTGTGACCTCATGGCGACGTGCGATCTGCTTGAGGGTCGGGCTCGACAGCAGCTCACCA CCCTGGGCGATGGGACAATAAGCCATCAGTGGCAAATGATGCTGTTGCCACCATGGCAACAGGTCGAACTCGATCCCGCGCTCTTCAATGTTGTAGAGCA CTTGATTGGTCGCACATGCAGGGGATGCGAGCTCCTGCAGGTCTGCCACATCAAAGTTGGAAACACCCCAGCGGCCGATTTTGCCGGCCTCGCGCAAACG
|
|
| Amino Acid Sequence |
>hypothetical protein
MPTPAYLSITGVKQGLITAGTFTQDSVGNIYQEGHEDQILVQAFAHQVIIPRDPQSGQPTGQRVHKPLMISKVFDKSSPLLFSALTSGEEVSCRLEWLRT SSAGTQEHYFTIELEGATIVDIQSRMPNCQDPDNAHFTHLEDVHFTYRKIIWTHEVAGTSGSDDWRSPVAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|