Pseudomonas sp. Eur1 9.41, CD10_RS0126155

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. Eur1 9.41 CD10DRAFT_unitig_0_quiver.2_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGCGTTTCAGCAATTCAACCTGTTCCCGCACTTGACCGCGCTGCAGAACGTTACCCTCGGCTTGCTCAAGGTCAAGAAGATGAGCAAGGATGAGGCGGT AGCCCTGGCCGAAAAATGGTTGGACCGCGTCGGCCTGCTGGAGCGCCGTAATCACTTTCCCGGCCAACTGTCCGGCGGCCAGCAACAGCGTGTGGCGATT GCCCGCGCCATTGCCATGAACCCCAGCCTGATGCTGTTCGACGAAGTCACCTCGGCCCTCGACCCGGAGTTGGTGGGCGAAGTGCTCAGCGTGATCAAGG GGCTGGCAGAGGAGGGCATGACCATGTTGTTGGTCACCCACGAAATGCGCTTTGCCTATGAGGTCTCGGACCAGATCGTGTTCATGAACCAGGGCCGCAT TGAAGAGCAGGGCAGCGCGAAGGACATCTTCGAACGGCCGCAGTCGCCGCGCCTGGCGGAATTTCTCAAGAACATTCGTTTTTAACAAGGAGCAACTTTT
DNA Sequence for Gene
>CD10_RS0126155
ATGAGCATTACTCGTTACGGCACCGGCAGCACCGCAGGTGGCGGCCAGCCACGTCCATTCGCCCGCGCCGTGGAAGCCGATGGCTGGCTGTACGTGTCGG GCCAGGTGCCTGCGGTGGACGGTGAAATCATCAATGGTGGCATCATCGAGCAAACCCGGCAGACGATGCGCAATGTGGTGGCGATCCTCGAAGAAGCCGG CTACGAACTCAAGGACGTGGTACGGGTGGGCGTATGGTTGGAAGACCCACGGGACTTCTGGAGTTTCAACAAGGTGTTCGGCGAGTACTTCACCCCGGAA CACGCCCCGGCGCGCGCCTGCGTGCAGGCCAACATGATGGTCGATTGCAAAGTCGAGATCGATTGCGTGGCCTACAAGAAAAAGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATACCCACTTTAAACCCACGACAAATCAATTGTGGGAGGGGGCTTGCCCCCGATAGCGGTGTGTCAGTCAAAAATGTATTCACTGGCACTCCCTCATCGG GGGCAAGCCCCCTCCCACAGGGGAATTGTGTCGTACCCAACAACTTGACGGGGCCAGAACCGCCATGACCGAAGACACCATCAAACGCCGCGCCAAAGGC CTGGACCGTGCGTTCGATATCCTCGATTTTCTCAAGGAAATCGGCCAGCCCCTGCGCCCGAATGATATTGCCAGCGGCATCGGCAGCCCCAAATCCACGG TCTACGAACTGGTGGCGTCGTTGCTGGAGCGGCGCATCCTGGAGACCGTGGGCAAGGACGGCCACGTGTACCTGGGGCGGCAGCTGTATTTTCTCGGCCA GGCACACTTGCGTCACTTCGACCTGACCCGTGAGGCCGACCACGCCTTGCAGGAGATCGTCAGCCAGACCCACGAAACCGCGCAGATGTGCCTGCTCAAC
Amino Acid Sequence
>endoribonuclease L-PSP
MSITRYGTGSTAGGGQPRPFARAVEADGWLYVSGQVPAVDGEIINGGIIEQTRQTMRNVVAILEEAGYELKDVVRVGVWLEDPRDFWSFNKVFGEYFTPE HAPARACVQANMMVDCKVEIDCVAYKKKG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site