Pseudomonas sp. Eur1 9.41, CD10_RS0117135
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. Eur1 9.41 CD10DRAFT_unitig_0_quiver.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAATCGGTATCGAGCCCAGTTGATGGGCTCGATGGAGAGCTGCTGTTCATGGTACTGACCTCGCTGTGAAAAACTCACGCGTGAGAAAATCTACAGGCAA TCCGCAAGGTACTCAATAGCTCACGCGTGAGATTTTTCCTTACATTTTTCAGCCACCGAAAAGACCCAGCCTACCCCGCCAACTCTCGCTCGATTTGCTC GTCTGCCGGGAAGTTTGTCCAAAAGCGCGACTTGATGGCACCAAGACAATTGTGCAGCAGCCTGTTGCACAATTTTCCGAACCCGACCACGCCTTAGCAA AAGCACGCCTGTACTTGAAATCGCGCGGCGAAGAACCCTGATGTCAGGGAAGGCAGGCTAGCCAGCCCACAGTACCGTCACAAGCGTTCATGAGCACTTC AGGAAGGGTCCTGCGCACCTCACAGAAAGGTCCTGCTGGCCCTTGACTCTCCCCTATACGGCAACCCCTACCCTGAATGCCCTTTTCAGGACCTATCACC
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| DNA Sequence for Gene |
>CD10_RS0117135
ATGAGTCAGCGCATCCTGGTCATCCTCGGCCACCCGTCCGCCGATAGTTTTTGTTCCGCTCTCGCGCACACTTATATCCACGCCGCTAAAACGGCCGGCC ACGAAGTCCGCGTCCTGCGCCTGGGTGATCTCAGCTTCGACCCCACCCTTAATCATGGTTATACCCAGGCTCAGACGCTGGAGCCCGACTTGCTCAGTGC CCAAGCCGACATCCTTTGGGCCGAGCACCTGGCGTGGGTTTTCCCTGTTTGGTGGGGCGGTGTCCCGGCTCTGATGAAGGGCTTTATCGACCGCGTTTTC CTCCCCGGCTTTGCCTTCAAATACCGCGCAGGCAAGGCATTCCCAGACAAGCTGTTAAAGGGCCGAACCGCGCACTTGTTAGTGACCCTCGACACGCCGC CGTGGTATTACCGCTGGGTTTATCGCATGCCGGCCATCCACCAGATGCGTCGTACCACGCTGGCGCTCTGTGGCATCACGACGAGCAAGACACTGCTGTT GGGGCCGGTGCTGGGCTCTACGCTGACGCAGCGGGCCAAGTGGCTGAAACAGGCCAGCGCACTATTTGAAAAAGGGAGTTTTCATGTACATCGGCAAAGC CGCGCAGTTGTCCGGCACGACCATCAAGGCGATTCGTCACTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGATCGGGCTGATGCCGGCGCCTGCGCGTCAGGGCGGTTATCGCGTTTATACCGAGCAGAGTGTCGAGCGGCTGATGTTTATAAAGTGCGCGCAACAG CTGGGGTTCAAGCTCAAGGAATTGCAGGAGATTTTGCTGGGGTACGAGGGTGATGCGCTTCCTTGGGACCGGGCTGAACAAGCCATCGCCGACAAGAAGC GCACGCTGGCCGCGCAAATCGCCGTATTGCAACAGATGCAGGCTGGGCTGATTGAGTTCGAAACCCAACTCAAAGGCGCTCAAGGGGACTGCTCGTCACT CAGTAGCGTCGCCATTTGAAGTAGCCCTTGCGTATGAATTAGTGCCGCCTTTTGCAAGCCCATTGCTCGGAGCCTTCTAGACGATGAGCCGAATACCCAG CACAATCGGCTCACAAAATGAGCCGAATAGACCCTCTATTCGGCTCACGCACCCAGGCACTCATCCATGGATCATCCGAACTGGATCTGGCAACACACCG
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| Amino Acid Sequence |
>NAD(P)H dehydrogenase
MSQRILVILGHPSADSFCSALAHTYIHAAKTAGHEVRVLRLGDLSFDPTLNHGYTQAQTLEPDLLSAQADILWAEHLAWVFPVWWGGVPALMKGFIDRVF LPGFAFKYRAGKAFPDKLLKGRTAHLLVTLDTPPWYYRWVYRMPAIHQMRRTTLALCGITTSKTLLLGPVLGSTLTQRAKWLKQASALFEKGSFHVHRQS RAVVRHDHQGDSSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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