Pseudomonas sp. Eur1 9.41, CD10_RS0111265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. Eur1 9.41 CD10DRAFT_unitig_0_quiver.2_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATGGCACCCTGCTGGACCTGGAGTGTGTGGGTCTCGTGCTGCAACAGGCACTGTCGCGCCTGGGTTCCTCGGCCCGATACGCCGCCGTGGCGGTTGCAG GCCCGTCGGTGATTACCCGGCTGATTGACATGGACGCCGGCCTGAGCGACGAGGAAATGGCCTGGAAGATCCAGATGGAAGCCGACCAGTTCATCCCTTA TCCATTGGATGAAGTGGCCATCGACTTTCAGGTTCAAGGGCCATCGGTTCAAGGCCCGCAGTGGGTAGAGGTGATGCTGGCGGCGTGCCTGCGCGAGCAG GTCGAAGCGCGCGAGGCGGTTTTGGCCATGGCGGGGCTGGTGCCGCGAGTGGTCGATGTAGAAGGGTTTGCATTGCAGCGCGCTTGCCTTCAGGATTTTG CCAGCTTCACGCCGGGTCATAGAGTCGATGGTGCACAATGGGCCTTGGATGCCCAAGGGATGGGAGTAGCTTGCGGGCTGGCCCTGAGGAGTTTCGCTGG
DNA Sequence for Gene
>CD10_RS0111265
ATGACACGAATCAATCTTTTGCCTTGGCGCCAGGCGCTGGCGGAGCGCAGGCGCAAATACCTGTTGGTGCTATTGCTGGCGTTTGCCTGCGTGGCGCTCG CGGCATTGTGGTTGGCTGATCAAGTGATCGACCAGGCGATAGACCGGCAGGTCAGCCGCAACAGCCGCCTGGAAGAGCACATCGCCACCCAGGACTCGCG CATCAAGACCATCGACGATCTTCAGGAGCGAAGCCAGCAACTGGCCGAACGCATGAAGGTGGTTCAGGACCTGCACGATGCCCGCTCTTCAGGGGCCCGA TTGTTCGAGCAATTGGCTCGTGCGGTGCCCGAAGGTGTCCATCTGCATGAGGTGGTCGCAAACGGCGACACCATCAGCATTCGCGGCACAGCTGAAAGCA ACCAGGATATCGCCCGTTTGATGCAGCAGCTCAAGCCAGCCCATGGCTCCAGTTCGACCCGTCTGCAGCGCGTGCAGGCCGAAGGTGCGCGCGGCGAAAG TGAATTCCAATTGATGGTTCGCCAGGGGGAATCCAGCGAGGCGCAACCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGCCCAGGCTCGATTTTTCCACGCTCTCTGACAACGCTGCTAAATGGTCCCTGCCGGGCAAGGTGCTGCTTGGCTGTGCGCTGGCCGGCCTGGTGCT GGCGATAGGCGAGGTTTCGCATGGCGGGCCGCAGCGGGAGCGATTGCACGGGCTTGAGGCGCGGGAGCAGGCGCTGCAGCAGCAACTCACAGAAAAGACC GGCTTGGCCGCCAGCCTTGAGCTGCGCACCCAGCAGGTGCGGAGTATGGAAGACAACGTTGCCAGCCTTCTCGGGCAATTGCCTGGCGAGTCCGAGGTGC CTGCCGTACTGGAAGACCTGGCCCGGCTGGCGGCTGCCCATGGGGTGTGGGTTGAAGGCATCAATGTGCTGGATGAAATGCCTCGCCAGCTCTATGTCGA ACAACCCATGCAGATAAGCGCCTCCGGGGCTTACCACGACCTGGCGACGTTTGTCAGTGCCTTGGGTGGGTTGCCTCGGGTAGTCACCGTGCAGGACGTT
Amino Acid Sequence
>fimbriae biosynthesis protein
MTRINLLPWRQALAERRRKYLLVLLLAFACVALAALWLADQVIDQAIDRQVSRNSRLEEHIATQDSRIKTIDDLQERSQQLAERMKVVQDLHDARSSGAR LFEQLARAVPEGVHLHEVVANGDTISIRGTAESNQDIARLMQQLKPAHGSSSTRLQRVQAEGARGESEFQLMVRQGESSEAQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site