Pseudomonas sp. Eur1 9.41, CD10_RS0110750
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. Eur1 9.41 CD10DRAFT_unitig_0_quiver.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCATGACCGCGTATATCTGCGATTACCTGCGCATCATGTCCTCCGGCAACATGGCGCCCCACGAGCTGGAAGGCCTGTTCGACATGGAATTGTTCAG CCTCAAGGAAGAGCTGGAGCATCCGTCCCACGCCGTGACCGGCATCGCCGACGGCATGCCCGGTTTCGGTATTGTCGCGGCGGTACTGGGCATCGTGGTG ACCATGGCGTCCCTGGGCGAGGGCGATCAGGCGGCCATCGGCATGCACGTAGGTGCGGCGCTGGTGGGCACCTTCTTCGGTATTCTCGCCGCCTATGGTT TCTTCGGCCCGCTCGCCACTTCCCTGGCCCACGATGCCAAGGAAGAGATCAACCTCTACGAAGCGATCAAGGCGTGCCTGGTGGCATCGGCGTCGGGCAT GCCGCCGTCGCTGGCCGTGGAGTTTGGGCGCAAGGTGCTGTACCCCAAACATCGCCCGAGTTTCTCCGAGCTGGAACAAGCGGTTCGCGGTCGCTAAGCC
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| DNA Sequence for Gene |
>CD10_RS0110750
ATGGAAAACAACCAGCCGATCATCATCAAGCGCGTCAAGCGCTTCGCTGCGGGGCACCATGGCGGTGCCTGGAAAATCGCCTTCGCCGACTTTGCCACGG CGATGATGGCGTTCTTCCTGGTGCTGTGGCTGATGTCCACCGCTACGCCAGAACAGAAGATCGCCATCGCCGGCTACTTCAAAGACCCGATTGGCTTTTC GGAAAGCGGCACGCCGTTTGTGATTGACCTGGGCGGCTCGCCGGAACTGGCGCCCGAGCGCACCATCAACCCCGAAGTGCAAACGGAGTCGCCCCAGGAA AAAATCCCGATTGAGCGCGACACTGTCGAGTCCATGGCCGAACAGGTCGAACAGGAGCGCCTGGAACTGTTGCTGCAGGAATTGCAGAACAAGGTGGAAG AAAACCCACAGTTGCTGAAGTTCAAGGACCAAATTTCCTTCGAGATCACCCCCGAGGGGCTGCGCATCCAGATTACCGATGCGGCCAACCGGCCGATGTT CGACTCTGGCAGTGCGCGCTTGAAGCCGTACTTTGAAGACATTCTGCTGGCCATGGCTGACACCATCAAGGCGGTGCCGAACAAGATCAGTATCAGCGGG CATACCGACGCCAAGCCCTACGCGGGCCAGGGAGATTTCGGCAACTGGGAACTCTCGGCCAACCGCTCCAACGCCGCCCGGCGTGCGCTGGTAGCCGGCA GCTACCCGGACCCGCAAGTGGCGCGCGTGGTGGGCTTTGCCTCCTCGCAGCTGTTTGATCCCAAAGACCCGTTCAACCCGGTCAATCGCCGTATCGACAT CGTGGTGCTGACCAAAAAAGCCCAGCGTGCGATTGAAGGCGATCAACCACCGCCACCGGCACCGACCCAGGGCGAGGGCGCGCCTGGCGAAGTGCCGGCC GACCCGAACGCGCTGCCGCCGGAGCAGGAACCGCTGCCGGCCCATGAGCTGCGCCAGAAGCTGAACCTGTTTGATGATGGTGGGGTGAAGGATCCTACGG TGCCCGCACCGGGGTCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGATCTATGCGCTGGAAACGTAAACGCCCCGATCATTCGGGGCGTTTTCATGTGTGTTCAAAGTGGGAGGTACGCTTTGATACCGCTGACTACGCCTCG CATGTCGTCGGCGCACAGGCGCGGGACGAAGTACTCCCGACCTTTGGTGCGAGTCTTTCTATGCAACTTGTCGAGGCGCTCAAAGCTGACGGTATAAATC ATGTCGCACTTCACCCATAGCTCTTTATAACCATCGGACTGAAGTGGATTGGTGCGTAGCAAGTGGTGCCAGTCGTATTGGGTCGCTGGTGCAGTAGAGG AGATTGGCACCACGGTGCAGAGCTTGCGATTGTGGGTCGCGGTAGGCGATATCACGACAACCTTGCGGATCTTCAGCATTTCCGGTGCAACAAAGCCTCG TGTGAAGTCACACAGCAAAACGTCGCCTTGTTTGGGGTGATAGTAGAGAGCCAAATGTTAATTCCCCACAAAAAGCAAAGCCGCCCGAAGGCGGCTTCAT
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| Amino Acid Sequence |
>flagellar motor protein MotB
MENNQPIIIKRVKRFAAGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYFKDPIGFSESGTPFVIDLGGSPELAPERTINPEVQTESPQE KIPIERDTVESMAEQVEQERLELLLQELQNKVEENPQLLKFKDQISFEITPEGLRIQITDAANRPMFDSGSARLKPYFEDILLAMADTIKAVPNKISISG HTDAKPYAGQGDFGNWELSANRSNAARRALVAGSYPDPQVARVVGFASSQLFDPKDPFNPVNRRIDIVVLTKKAQRAIEGDQPPPPAPTQGEGAPGEVPA DPNALPPEQEPLPAHELRQKLNLFDDGGVKDPTVPAPGS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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