Sequence View: PPUBIRD1_0306, Pseudomonas putida BIRD-1

Pseudomonas putida BIRD-1, PPUBIRD1_0306

Cytoplasmic

Cytoplasmic Membrane

Periplasmic

Outer Membrane

Extracellular

Unknown

Sequence Data

Strain	Pseudomonas putida BIRD-1 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene	CTGCTGTGGGTGCTGCTTATCTATTTCGGCACCGTCGGGCTCATGAACAGCCTCGGCGAAGCCCTGAACATGCCGGGCCTTGAGCTAAGCGCCTTTGCCG CGGGCGTGATCGCCCTGGGCCTGTGCTTTGGCGCCTACGCCACCGAAGTGTTCCGTGGCGCCATCCTCGCAATCCCCAAGGGCCACCGCGAAGCCGGCCT GGCGCTGGGCCTGTCCAAGGGCCGCATCCTCTCGCGGATCATCCTGCCGCAGATGTGGCGCATCGCCCTGCCCGGCCTTGGCAACCTGTTCATGATCCTG ATGAAGGACACCGCCCTGGTATCGGTAATCGGCCTTGAAGAAATCATGCGTCATTCGCAGATCGGCGTGACCGTGACCAAAGAGCCGTTCACCTTCTACA TGGTCGCGGCCTGCATCTACCTGGGCCTGACCGTACTTGCCATGACCGGTATGCATTTCATGGAAAAACGCGCCGCTCGCGGCTTTGCGAGGGCTGAATA BLASTN Search
DNA Sequence for Gene	>PPUBIRD1_0306 ATGAATTGGGAAGTCATCTTCAAATGGCTGCCACGCCTGGCCGAGGGTGCGGTCCTGACCCTGGAGCTGGTGGCCATTGCCGTGGTTGCCGGGTTGATCC TGGCCATCCCGCTGGGCATCGCCCGTTCCTCGCGCCACTGGTACGTGCGCGCGGTGCCGTTCAGCTACATTTTCTTCTTCCGTGGCACGCCGCTGCTGGT GCAGTTGTTCCTGGTCTATTACGGCCTGGCGCAGTTCGATGCGGTGCGCTCCAGTTCGCTGTGGCCGTACCTGCGCGATCCGTTCTGGTGCACGGTGCTG ACCATGACCCTGCACACCGCCGCGTACATTGCCGAGATCCTGCGTGGCGCGCTGCAGTCGATCCCCAAAGGTGAGATCGAAGCGGCCCGGGCGCTGGGCA TGTCGCGGGGCAAGGCGCTGTTCTACATCATGCTGCCACGCGCCGCGCGTATCGGCCTGCCGGCGTACAGCAACGAAGTGATCCTGATGCTCAAGGCCAG TGCCCTGGCCAGTACCGTGACCCTGCTGGAGCTGACCGGCATGGCCCGTACCATCATCGCCCGCACCTACCTGCCGGTGGAAATCTTCTTCGCCGCAGGC GTGTTCTACCTGGTGATCTCGTTCATGCTGGTGCAAGGCTTCAAGCTGCTGGAGCGCTGGTTGCGCGTGGATGCCTGCCAAGGCCGCTGA BLASTN Search \| DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene	CATCTCCTAGCCTTCTTCGCGGGCACGCCCGCTCCTACAACAGGCCTATGCTGAACCTTCGTAGGAGCGGGTTTACCCGCGAATAGCCCCTCAACCCCAA CACACATCCCCATGCCCAGCCCCCTCCACAGCCACCACCTCAGCACCCGCTTCCAGGCCCTCGACCAGTTCCTGATCGAGCACCAACAGCTGTGGAAACC CCGCCCCTTCACCACCCTGCAACTGCCTTGGGAAACCACCCACCCAGAACTTGCCGCCCACCTGCGCCAATGTTCCCTGGCAGACGCCGAAGCCGACAGC GCCACTGACCGCTTGCCTGCCCCATTCCCGCAACTGGCCGAACAAGCCCGACAGCTCGCCACGCTCGGCAGCCTTGCGCAAACCAATCTACCGCCTGCCG CCCACCGCCTGGACGTCGCCGTCCCCGGCCGCAAATGGCAGCAGATCGAAGCCTTCGCCAGCCACCTGGCCTTCCGCGAGCAGCCCCGGCACTGGCTGGA BLASTN
Amino Acid Sequence	>Polar amino acid ABC transporter, inner membrane subunit MNWEVIFKWLPRLAEGAVLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFFRGTPLLVQLFLVYYGLAQFDAVRSSSLWPYLRDPFWCTVL TMTLHTAAYIAEILRGALQSIPKGEIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIARTYLPVEIFFAAG VFYLVISFMLVQGFKLLERWLRVDACQGR BLASTP \| DIAMOND BLASTP (DIAMOND is faster than BLASTP) Search for conserved domains in this protein at NCBI CDD site