Pseudomonas sp. Eur1 9.41, CD10_RS0109110
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0015891 | siderophore transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0009279 | cell outer membrane |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0015343 | siderophore transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0038023 | signaling receptor activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 99 | 114 | - |
| PANTHER | PTHR30069 | TONB-DEPENDENT OUTER MEMBRANE RECEPTOR | IPR039426 | TonB-dependent receptor-like | 3 | 752 | 1.0E-111 |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 50 | 190 | 1.8E-40 |
| CDD | cd01347 | ligand_gated_channel | - | - | 71 | 752 | 0.0 |
| NCBIfam | TIGR01783 | JCVI: TonB-dependent siderophore receptor | IPR010105 | TonB-dependent siderophore receptor | 72 | 752 | 2.0E-80 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 357 | 376 | - |
| SUPERFAMILY | SSF56935 | Porins | - | - | 58 | 752 | 0.0 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 196 | 752 | 0.0 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 276 | 750 | 7.6E-58 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 98 | 119 | - |
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 71 | 185 | 4.2E-26 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.