Pseudomonas sp. Eur1 9.41, CD10_RS0106365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. Eur1 9.41 CD10DRAFT_unitig_0_quiver.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATGTGGGTTTTCTCGGCGCGGCCCAGGTCGACCGTTTCGGCAATATCAACACCACCGTGGTCGGTGATTATCACCAGCCCAAAGTGCGTTTGCCGGGTG CCGGTGGCGCGCCGGAAATCGCCGGTTCCGCCAAGAGCGTGCTGATCATTCTGAAGCAGTCGTCCCGTTCGTTCGTCGACAAACTCGATTTCATTACCTC TGTGGGGCACGGCGAAGGTGGCGACTCACGCAAGCGTCTGGGCCTGCCCGGCGCCGGCCCGGTGGGCATCATTACCGACCTGTGCATCATGGAACCGGAG GAGGGCAGCCATGAGTTCGTGGTCACTGCGCTGCATCCTGGCGTGACCCGCGAGCAAGTGGTCGCCGCCACCGGCTGGGCGATTCGCTTTGCCGACCAGG TGAGCACCACCGCTGAACCCACCGAGACCGAACTGACCGCCCTGCGTGACCTCGAAGCGCGCACGGCCGCTGCCCACGGCCAAGCACCGGGAGAAGCCTG
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| DNA Sequence for Gene |
>CD10_RS0106365
ATGCGCGAGGTTTATATCTGTGATGCCATTCGCACGCCTATCGGCCGTTTCGGCGGTGGCCTGTCCACGGTGCGTGCCGACGACCTGGCGGCGCTGCCGA TCAAGGCGTTGATCGAGCGCAACCCGTCGGTGGACTGGAGCGCCGTGGACGAAGTCTTCCTCGGCTGCGCCAACCAGGCCGGTGAAGATAACCGCAACGT GGCACGCATGGCGTTGCTGCTGGCGGGGCTGCCGGAAAGTATTCCTGGTGTGACCCTCAACCGCCTGTGCGCCTCGGGCATGGATGCCATCGGCACCGCC TTTCGTGCGATTGCCAGCGGTGAAATGGAGCTGGCGATTGCCGGTGGCGTCGAGTCGATGTCCCGTGCACCGTTTGTGATGGGCAAGGCCGACGCGGCGT TCTCGCGCAACATGAAGTTGGAAGACACCACCATTGGCTGGCGCTTTATCAACCCGCTGATGAAGGCCCAGTACGGCGTGGATGCCATGCCGCAGACCGC CGATAACGTGGCCGACGACTACCAGGTTTCCCGCGCCGACCAGGACACTTTCGCCCTGCGCAGCCAGCAACGCACCGCCGCCGCCCAGGCTGCCGGTTTC TTTGCCGAGGAAATCGTACCGGTGCGGGTCGCCCATAAAAAAGGCGAAACCCTGGTGGAACACGATGAGCATCCACGGGACACCACGTTGGAAGCCTTGG CCAAGCTCAAGCCGGTCAACGGTGCGGACAAGACCGTCACCGCCGGCAATGCCTCGGGCGTCAACGACGGCGCCGCCGCGCTGATCCTCGCCAGCGCCGA GGCCGTCAAGCAACACGGCCTCACCGCCCGCGCCCGTGTGCTGGGCATGGCCAGTGCCGGTGTCGCCCCGCGGGTGATGGGCATCGGCCCGGTGCCGGCG GTACGCAAGCTGGTGGAGCGCCTGGGGTTGGCGGTCACTGACTTTGACGTGATCGAACTCAACGAAGCCTTCGCCAGCCAAGGCCTGGCGGTGCTGCGCG AACTGGGCATTGCCGACGATGCGCCGCAGGTCAACCCGAACGGCGGCGCCATTGCCCTCGGCCATCCCCTGGGGATGAGTGGTGCGCGGTTGGTGCTGAC GGCCCTGCACCAATTGGAAAAAACTGGCGGCCGCAAAGGCCTGGCGACCATGTGCGTGGGCGTCGGCCAAGGCCTGGCCCTGGCGATTGAACGCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAACTAAAAGAGGATTGCTCCATGAGTGACAAGCCCGGTTACCGGCGCCCGCAAGCGGGCACCCAACCTGATTACCTGCACCCGGCCTACCAGTCGACGA ACCTGCGTTCGCCGTCCCAGCCTTTGGTGTTCCTGCCCCATTCCTTGTCGGAAATCACCGGCCCGACCATCGGCGCCGAACGTATCAACGACAAGGACAA CGACCTGACGGCCCAGCATGACGGCGAGCCGCAAGGCGAGCGCATCATCATCCATGGCCGTGTGCTGGACGAAAACGGCCTGCCGGTGCCGGGCATTCTT GTGGAGATCTGGCAGGCCAATGCCGCCGGCCGCTACAACCACAAGCGTGACCTGCACGATGCACCCCTGGACCCGAATTTCACCGGCACCGGGCGCACCG TCACCGACGCCGACGGCTGGTACCAGTTCCAGACCATAAAACCCGGCGCCTACCCGTGGGGCAACCACCACAACGCCTGGCGCCCGGCGCATATCCACTT
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| Amino Acid Sequence |
>beta-ketoadipyl CoA thiolase
MREVYICDAIRTPIGRFGGGLSTVRADDLAALPIKALIERNPSVDWSAVDEVFLGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTA FRAIASGEMELAIAGGVESMSRAPFVMGKADAAFSRNMKLEDTTIGWRFINPLMKAQYGVDAMPQTADNVADDYQVSRADQDTFALRSQQRTAAAQAAGF FAEEIVPVRVAHKKGETLVEHDEHPRDTTLEALAKLKPVNGADKTVTAGNASGVNDGAAALILASAEAVKQHGLTARARVLGMASAGVAPRVMGIGPVPA VRKLVERLGLAVTDFDVIELNEAFASQGLAVLRELGIADDAPQVNPNGGAIALGHPLGMSGARLVLTALHQLEKTGGRKGLATMCVGVGQGLALAIERV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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