Pseudomonas sp. Eur1 9.41, CD10_RS0106320
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. Eur1 9.41 CD10DRAFT_unitig_0_quiver.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGTCGTGTTCCTGTGCCTGGCAGCACTGTACGAAAGCTGGTCGATCCCGATCGCGGTGATTCTGGTTGTGCCACTGGGTGTGATCGGTGCACTGATCG CCACCAGCATGCGCGGCTTGTCCAACGACGTGTTCTTCCAGGTGGGCCTGTTGGTGACGGTGGGCCTGGCGGCGAAAAACGCCATTCTCATCGTGGAATT CGCCAAGGAACTGCATGAGCAAGGCAAAGGCATCGTCGAGGCGGCTATCGAAGCGTCCCGCATGCGTCTGCGCCCGATCATCATGACCTCGTTGGCGTTC ATGCTCGGCGTACTGCCGCTGGCAATCTCCACCGGCGCCGGCTCAGGCAGCCAGCACGCAATCGGTACCGGCGTTATCGGCGGTATGATCACGGCCACTG TGCTGGCGATCTTCTGGGTGCCACTGTTCTACGCAACGGTATCCGCTGCTGGCGAACGCAAAAAGAAAGACACTACTGAAACTCCTAAAGAGGCTGGCCA
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| DNA Sequence for Gene |
>CD10_RS0106320
ATGAGCAAGTCGCTACTTTCCCTAACCGTCACCGCCTTCGTGCTCAGTGGCTGCTCGCTGATACCTGACTATCAGCGCCCCGAAGCGCCGGTGGCCGCGC AATTCCCGCAGGGGCCGGCGTATTCGTCGGCCCAGGCGCCGAGCCAGGCCGCTGCCGAGCAAGGCTGGAAGCAGTTTTTCCATGACCCTGCCCTGCAACA GCTGATCCAGACCGCGTTGGTGAACAACCGTGACCTGCGTGTCGCGGCGCTGAACATCGACGCCTATGCAGCGCAATACCAGATCCAGCGTGCCGACCTG TTCCCGGCGGTATCGGCCACCGGTAACGGCAGCCGTTCGCGCACCCCGGCCAAGCTGTCGCAGACCGGCGAATCGACCATCGCCAGCCAGTACTCGGCGG GCCTGGGCATCAGTTCGTACGAGCTGGACCTGTTCGGCCGCGTGCGCAGCCTCAGTGAAGAAGCGCTGCAAAAGTACTTCGCCACTGAAGAAGCGCGCCG CAGCACCCAAATCAGCCTGGTGGCCAGCGTGGCGAATGCCTACCTGACCTGGCAGGCCGACAAGGAGCTGCTCAAGCTGACCCAGGACACCCTGGCCGCG TTTGAGCAAAGCTACAAGCTCACCTCGCGTAGCAATGAAGTCGGCGTGGCCTCGGCCCTCGACCTCAGCCAGGCACGCACCTCGGTGGAAAACGCCCGTG TGCAACTGGCGCGTTACACCCGCCAGGTGGCCCAGGACGAAAACAGCCTGACCCTGCTGCTGGGCACCGGCCTGCCAGCGAATATCGCCAGCAAGCCGCT GTCCGATGACCTGCTCAGCGAAGTGCCGGCCGGGTTGCCATCAGACCTGCTGCAACGTCGTCCCGACATTGTGCAGGCCGAGTACAACCTCAAGGCGGCC AACGCCAATATCGGCGCGGCCCGTGCGGCGTTCTTCCCGAGCATCAGCCTGACCGCCAGCGCCGGTACCGCCAGCCCTACCCTGGGCGGCCTGTTCAAAG GCGGTTCGGGGACCTGGGCGTTTGCCCCGCAGATCAACATCCCGATCTTCAACGCCGGTAGCCTGCGCGCAAGCCTGGACTACTCGAAGATCCAGAAAGA GATCAACGTGGCCAACTACGAGAAGGCCATCCAGACCGGCTTCCAGGAAGTCTCCGACGGCCTCGCCGCGCGTGCGACCTACAAGCAGCAACTGGATGCC CAGCGCGGCTTCGTCGAGGCTAACCAGGATTACTACCGCCTGGCCGAGCGTCGCTACCGCATTGGTGTCGACAGCAACCTGACCTTCCTCGACGCCCAGC GCCAACTGTTCAGTGCCCAGCAATCGCTGATCACCGACCGCCTGGCGCAGCTCACCAGCGAGGTCAACCTGTACAAGGCCCTCGGCGGTGGCTGGAACGA GCAGACCGCGAAGAACGAGCCGTTGAAAGAACAAGCACCGCCGTTGAAGTTGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAGCGCGGGTGTGAAAAAACCGCTTCCCTTACCGGAAGCGGTTTTTTTTATGCCTGCGTTATTGCCCTCACAAGTTACGTTCGATCATCGCCCACAACCC GCCCTCCCCCACTTTCATCGCCCCCGCACCGCCGCGCACCATGGCCGTCACCTGCATAAACCCAATAACAACAGGTCCACACCATGAGCACTTTCCAACC GCGCCAGCTGCTGCTGGCGGCTGCTGTCGCCAGTTCTGCCCTGCCCGTTTTCGCCCAGGAGCACGGCTTTCTCGAAGACGCCAGCGCCAACCTCAACCTG CGTAACTTCTTCTTCAACCGCAACTTCACCAACCCGACCAAAGCCCAGGGTGGCGCGCAGGAGTGGACGCAAAGTTTCATCCTCGACGCCAAGTCCGGTT TCACCCAAGGCACAGTCGGTTTTGGTGTGGACGTGCTGGGTTTGTACTCGCTCAAGCTCGATGGCGGTCGTGGCACGGGCGGCACGCAGTTGCTGCCGCT
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| Amino Acid Sequence |
>multidrug transporter
MSKSLLSLTVTAFVLSGCSLIPDYQRPEAPVAAQFPQGPAYSSAQAPSQAAAEQGWKQFFHDPALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADL FPAVSATGNGSRSRTPAKLSQTGESTIASQYSAGLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANAYLTWQADKELLKLTQDTLAA FEQSYKLTSRSNEVGVASALDLSQARTSVENARVQLARYTRQVAQDENSLTLLLGTGLPANIASKPLSDDLLSEVPAGLPSDLLQRRPDIVQAEYNLKAA NANIGAARAAFFPSISLTASAGTASPTLGGLFKGGSGTWAFAPQINIPIFNAGSLRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARATYKQQLDA QRGFVEANQDYYRLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNEQTAKNEPLKEQAPPLKLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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