Pseudomonas sp. Eur1 9.41, CD10_RS0103575
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 711 | 935 | 1.6E-34 |
| SUPERFAMILY | SSF69304 | Tricorn protease N-terminal domain | - | - | 979 | 1189 | 2.75E-5 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 538 | 675 | 1.1E-10 |
| Pfam | PF20148 | Domain of unknown function (DUF6531) | IPR045351 | Domain of unknown function DUF6531 | 324 | 396 | 9.6E-19 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 623 | 661 | 0.0025 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 272 | 307 | - |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 1058 | 1093 | 4.7E-5 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 1058 | 1088 | 0.0015 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 770 | 808 | 2.2E-5 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 727 | 754 | 2.9E-6 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 272 | 316 | - |
| CDD | cd20743 | FIX_RhsA-like | - | - | 24 | 112 | 7.15764E-26 |
| Pfam | PF03527 | RHS protein | IPR001826 | RHS protein | 1295 | 1331 | 8.0E-16 |
| NCBIfam | TIGR03696 | JCVI: RHS repeat-associated core domain | IPR022385 | Rhs repeat-associated core | 1322 | 1403 | 5.4E-28 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 936 | 1402 | 3.3E-82 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 580 | 617 | 0.011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 24 | - |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 748 | 782 | 5.6E-6 |
| PANTHER | PTHR32305 | - | - | - | 642 | 1088 | 8.4E-42 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 790 | 824 | 1.5E-4 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 727 | 768 | 4.1E-8 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 22 | - |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 664 | 704 | 2.0E-5 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 831 | 866 | 0.003 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 685 | 725 | 1.2E-4 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.