Pseudomonas sp. Eur1 9.41, CD10_RS0102495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. Eur1 9.41 CD10DRAFT_unitig_0_quiver.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGACGAGCTGGGCCTGTTCGCCCAGGGCGGTGACATGCGCCATATCGCCCAGAACGGTCACCTGCTGCTGCAGGCCCAGCACAACAGCATCCAGGTGC AAGCAGATCAGAGCGTGGAAATCAGCGCCAGCCAGCAACACGTGCTGGTGGCGGCGGACAAACACATCACCCTGCTGTGCGGCGGGGCCTACATCAAGAT GCAGGGCGGCAATATCGAGTTGGGCATGCCCGGCGATTTCATCGTGAAGGCTTCGAACAAACAATTCATTGACCCCAGCCATGCCGCGACGCAACTCAAC AGCTGGTCCAGCACCTCGTTCAACGAACGCTTTCAACCCTTTTTCAACGGTCAACCCATGCGCAACCGTGCCTACGCCTTGGTTCGCAAAGACGGCGCAC GCTTCGAGGGCTGCACCGATGGCGAAGGCTACGTCACCCTGCAACAGGGCATGACACTGGAAGGGTTGACATTGGAATGGCTAGAAAACGGAGACCCCAC
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| DNA Sequence for Gene |
>CD10_RS0102495
ATGACCAATAGCCCGACGACGCCCCGTGTCGCCCCCATGCACTACAACGCGCGGGGCAACCCTGTGCATACCTGGACCCTCACGCCCAGCCATATCACCG ACCCGGTGCACTGCATATTGCCGCCGGACGGGGTGCTGCCGGTGATTTTTGTGCCGGGGATTATGGGGTCGAATTTGAAGAGCAAGCCGGAGAAAGGAAA GGATAAGAAAAAGGCGGGGCCCGTCTGGCGGTTGGATGCGGGGTTCATGGGTAAGAATATGTGGTTGGCCCTGAACTGGATAAACAAAAAGGCGGGTATA CGACAGCAACTATTGCACCCAGCCAGGGTAGAGGTTGATAACAAAGGCGCAGTGCCGGAGCGCTCTGTCGGCACGGTCATAGTGCCGCCAGAGCCGGACA GGAAAAAAACCATCCTGGCTCTGACCAAGCGCTACGAAGAGCGCGGATGGGGCGAAGTCAGCGAAACCAGCTACCACGCGTTTCTTCTGTGGCTGGAAGA CACCCTTAACAGCGAATTCATGCCGCATAAATGGCCGCAATTCGACATTCGGCCTGAGCATCTGCATACGCGCAGTGTCGAGCCCGGCCCGGTTCAAGTC ACCGAGTTGAAACCCGAAATGCCCATCGCCATGCCGGGGTTGGGCGCTAACCTGGCGGCGCAGTTGCCGTCGATTATTTCGCACGAGTTGGCGGCGCGTG GTGGCTACCGCATGCCAGTGCATGCCTGTGGTTACAACTGGCTGGACTCCAACGAGGAGGCCGCGTCAAGGCTGGCTGAGCGTATTGATGAACTCATGCA GCAGTACGGTCGCAACTGCCAACAGGTGATTCTGGTTACCCACTCCATGGGCGGGCTGGTGGCACGGCGATGCGCGCAGCTACCGGGTATGGCCGACAAA ATTGCCGGCGTCGTGCACGGCGTGATGCCCGCCATCGGGGCGCCGGTCGCTTACCGTCGCTGCAAGGTCGGCATGCGCGACGAAGACCCCATTGCCGGCG CGGTCATTGGCCCCACCGGTCAGGAGGTCACCGCTGTATTTGCGCAGGCACCCGGTGCCTTGCAATTGCTGCCCACCCAGGACTATGCCCCGGGCTGGCT GCGGCTGATTGACGAGCGCGGAGCCCCGGCTATGCCGCGTCAACCGGTAAAAGATCCTTATGAAGAGATTTATCTACGCCGCGACCGTTGGTGGGGATTG TTGCGTGAAGAGTGGTTGGCACCGAAGGATGGGGATCCGATTACGTGGGAAGATTTTGAGGAAAACATGTCGGAAGCGAAGCGGTTCCATCAGAAACTCG CTGGCTCCTACCACCCTCAAACCTACGTTTACTACGGCAACGACGATAAGCACCCCAGTTTCGAATCCATCACTTGGGAAATGCGTCGTGGGTCTCGCCT CAATGGCCCTTATGCCTCAAGCCCGGATGCTTTCACGGTGTCCAGCCTGCAAATGCATGAGGTGCGTGACGACGGGCGAAGCCCGTTGTACGTAGGCGGG CAAGCCGAAAGTGTAATGCCCCCACGCGGTGACCCGAATGCGCCAGTAAAGACCGTACAGACCAGCTATTGGGAACTGCATTGCCGTATGCAGGACGGCG CTGGCGACGGCACCGTACCGGTGAGCTCCGGCCGCGCGCCGATCAGGCAGGTCCGCCAAGGTTCTGTCCGCCAGCAAGTGCAGGCCCCAGGGTTCGATCA TGAAGCGTCCTACGCCAACCCGCTCACCCAGCAATTCACCCTCTACTCCCTGATCAAGATCGCGGCGAAAGCCAAGAGGCCTCTATGCGCAGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGTTTTTTTTACATGCCTGCTGCTTGGATCGGTTGCAGGGTGCACCACTTTCAGACAACCCAGTGAACAGGAGAAACAAATCGTGCACGAACTGACCAG CAACATGCGCACCTGGGCGCTGGGCCGTGGGCTGATAGATTTGCCCGCCAACTGGACGGGGGGCGGGGATGTGAAATTGTACTACGGGCTGGGGGCCGAT CATGCATCCGTTGAAGTGCGGGTGTTGGGCGAAGGGGTGTCACAGCAACGCTTTTCCGCTGCCTTGCAGGAGCGGGCCAGCCGGATCGCCGCGGTCAAAA ATTATGAGATGGATGACGTATCAATGCTGGTGTCAGCCAAAGCGCAGACACCGCAAAGTGTCATGTTGCAATACTACCGGCGTCCAACACCGCGTCAGAC TTTCGTTCACGAACTCCACCTGCTGGTCGATGATGTCTACGTCATGCTCCGAGCAGACTCCTTCAAGGGTAATACCGCCCCTGTTGAAGATCGTCTGTTA
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| Amino Acid Sequence |
>hypothetical protein
MTNSPTTPRVAPMHYNARGNPVHTWTLTPSHITDPVHCILPPDGVLPVIFVPGIMGSNLKSKPEKGKDKKKAGPVWRLDAGFMGKNMWLALNWINKKAGI RQQLLHPARVEVDNKGAVPERSVGTVIVPPEPDRKKTILALTKRYEERGWGEVSETSYHAFLLWLEDTLNSEFMPHKWPQFDIRPEHLHTRSVEPGPVQV TELKPEMPIAMPGLGANLAAQLPSIISHELAARGGYRMPVHACGYNWLDSNEEAASRLAERIDELMQQYGRNCQQVILVTHSMGGLVARRCAQLPGMADK IAGVVHGVMPAIGAPVAYRRCKVGMRDEDPIAGAVIGPTGQEVTAVFAQAPGALQLLPTQDYAPGWLRLIDERGAPAMPRQPVKDPYEEIYLRRDRWWGL LREEWLAPKDGDPITWEDFEENMSEAKRFHQKLAGSYHPQTYVYYGNDDKHPSFESITWEMRRGSRLNGPYASSPDAFTVSSLQMHEVRDDGRSPLYVGG QAESVMPPRGDPNAPVKTVQTSYWELHCRMQDGAGDGTVPVSSGRAPIRQVRQGSVRQQVQAPGFDHEASYANPLTQQFTLYSLIKIAAKAKRPLCAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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