Strain | Pseudomonas sp. FH4 scf_29086_225.1_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCGTCGCGGGTACACACCCATTTCGATGACGAAGACCAGGGTCAACGGCTTGACCTGCAAGCGGTTCTCGGAGTGCCCGGCGCTGGGGTCCATGTCTAC GTCTGTGGGCCGGCCGGCTTCATGGATTGGGTCATCAGTGAGGCGGCCAAGGCCGGTCATGCCCAGGACCATATCCATCGTGAGTACTTCCAGGTCGAGG TCGACAGCAGCGGCCAGGGCTTTGAAGTGGTCGCCGCGCGCAGCGGCAAGCAGGTGCAGGTGCAAGAAGGCCAAAGCATCCTCAATGCCCTGGCCAGTGT CGGTATCAAGATTGAAATCTCCTGCGAGCAGGGGGTGTGCGGGACGTGTCTGTGCGATGTGCTGGAAGGTGAGCCCGACCATCGGGATGTCTACCTCACC GACGACGAAAAGGCCGCCAATGACCAGATCCTGGTGTGTTGCTCGCGGGCCAAATCGAAAAAACTGGTGCTGGACATCTGAATTGGCGGAGGGCAAGACC
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DNA Sequence for Gene |
>H097_RS00145
ATGGTAGATACAACAGGTTTTCGCAATGCAATGGCATTGCTCGGCGGCGCCGTCTCGGTGATCGCCACCGATGGCGCAGCCGGGCGCTTCGGCTTTACGG CCTCGGCGGTATGCAGCGTGACGGATCAGCCGCCGACCCTGCTGGTGTGCATGAACCGGGCGTCGACGTCCAATATCAACTTCAAGAGCAACGGTGTGTT GAGTGTCAACGTACTGACCGCCGATCACCAGGCGATTTCCGGGGTGTTTGCCAACCGTGACATGAACACCGAGCAGCGTTTTGCCTGTGCCCAGTGGGTG ACCCTGGAAAGTGGCGCGCCGATTTTGCAGGAGTCGCTGGTGAGTTTCGATTGCCGCATCGCCCAGGCCCATGAGGTGGGCTCCCATACGATTTTCTACT GTGAGGTGCTGGGTATCTGCAATGGCGAAAGCCAGGAAGGCCTGGTGTATTTCAACCGTGCCTATCATCGCCTGGGGGACGCATCGAAGGCCGCTTCTTG A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGTTGCCAACTAACTTGTCCGGTTCTCTAAAACAACAATAAGCGTGCTCCGCACGCATGCGTCTTTTTGCAGCAAGTGGTTATAAAAACAAGACTGCGG ATTAACTGCCCATTAGTTATCTGCCCCACTCAAATGTTTTGCGCGCATATAAAGGAACCACCGATGCCTCTTGAAAATAGAATGGCCCGCGACTGCGTGT TCGTCGGCCTGCTGGGCTGCCTGACGCCGCTATTTGCCCACGCCGACTTTATCAACGACCGTCAAATCAGCCTGGGCCTGCGCAACTTTTACCTGGACCG GGACTTTCACCAGACGGATGCACCCAAGTCCCGGGTCGGCAGTTGGACCCAGGGTTTCGACTTCAAGGCCGCCTCAGGCTACACCGAAGGCCCTGTGCAG TTCGCCCTCGATCTCTACGGACAGTATGCGTACCGCCTGGACGGCGGTGGCGGGCGTGGGCCGGACTCGGTGATCCCGTACGACGACAGCCGTGGCGAAC
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Amino Acid Sequence |
>flavin reductase
MVDTTGFRNAMALLGGAVSVIATDGAAGRFGFTASAVCSVTDQPPTLLVCMNRASTSNINFKSNGVLSVNVLTADHQAISGVFANRDMNTEQRFACAQWV TLESGAPILQESLVSFDCRIAQAHEVGSHTIFYCEVLGICNGESQEGLVYFNRAYHRLGDASKAAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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