Pseudomonas sp. FH4, H097_RS05225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FH4 scf_29086_39.1_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACTGCGCCGCTGTGGCTAGACGATTTAGACGCCGCGGGTATTCCCCACCAGTGGAGCACCGACATCCTCACCCGCCTCTGGCGAAAACTGGCACTCAAC TGTGCGATCAACCCACTGACCGTGCTCTATCAATGCCGTAATGGCGGGCTGCAGGAGCATCAATGCGAGGTAGCGACCTTGTGTGCCGAACTCGCCGAGC TGCTGGAGTGCTGCGGCCAGCCCGCAGCGGCGCAGGATCTGCAGGCTGAAGTGGAGCGGGTGATCCAGGCGACGGCGGCCAACTTCTCGTCGATGTACCA GGATGTGGCCAACGGCCGACGGACCGAGATCAGCTATCTGCTCGGCCATGCCTGCCAGGCGGCCTTGCGCCATCGCCTGAGCCTGCCGCACCTGCAACAA CTGCATGTGCGCCTGGCCGGCTACCTGGATGCACGCGGATTGCCCAGCGACTGAGGCACGCGCTACCCTGCCAACTTGATCCTTGCCTGCGAACAACCTG
DNA Sequence for Gene
>H097_RS05225
ATGCCACTGCGCCAGCGTCTCGAAAATCTCCCCGTAGGGCAGAAACTGCTGGCGGCCCTGCTGGTACTGCTGACTACCGTGCTACTGGTGGCCAACCTGA CCTTTATCAGCGCCGCCTACTGGATCTCCCAGGAAAGCATGGCCCCGCAAGCCTTGCAGGCGATTGGCCGACTGGTCTCCAACCCGGCACTCGCCGCGCA AGCCCTGGACTCTCCCGCCAAGGCCGATGCCCTGCTCAATGAGCTGACCAGCTATTCGCCACTGCGGGCGGCGGCCCTGTATGACGGTGAAGGCAGTCGC CTGGCGCAGTTGCAACAAGGCGATCGCCTGCAACTGCCAGCGCACTATCGCGATATCGAAGCCTGGCGCGTTACTGAGTTTCGCAGCAATCAAGTCATCA CCCTGCCCCGCCCCGGCCTGCCCTCGGGGCATTTGCTGCTGGTGGCCAGCAGCGAGCTGCCAGTCGCCTTTTATACGGGCACCCTGACTGCCAGCCTGGG CATCCTGATTTTCAGCGTATTGCTGTGGATGATCATCGCCCGGCAGATCAAGCGCCTGATTACCCGGCCCATCCATGAGCTGGAAGAATTGTCGCGCCAA GTGACTCGCGAAGAGAACTACGCCCTGCGGGCCGGTCGCGGCAACCATGACGAAATCGGCAGCCTGGCTGAAGCGTTCAATACCATGCTGTCGCGCATTG AAGCCCGGGAGCAGCAACTCAAGCGCGCGCGGGATGACTCCCAGGCCGCCTATGATCAGGCCCAGGGCCTGGCCGAAGAGACGCGGCATACCAACCGCAA GCTGGAACTGGAAGTCCAGGTGCGCAGCAAGATCGAGAAAAAACTCACCGGTTTCCAGAACTATCTCAACAGTATCATCGACTCCATGCCCTCCGCCCTG ATCGCACTGGACGAACAGCTCTACGTCACGCAATGGAACCAGGAAGCCAGCGCCCTGTCCGGTACGCGCCTGGGTGAAGCCCTGAACCAGCCGATCTTCC TCGCCTTCGAACCCCTCAAGCCCTACCTGCCCCAGCTCAAGGCCACGGTGGAGCAGCACACGGTGGAGCGCATCGAGCGCGTCACCTGGATCAAGGACGA CGAACCCAAGCACTACGCCCTGACCTTTTACCCGCTGATGGGCGGCGCCGGGCGCGGGGTGGTAATCCGTATCGACGACATTACCCAGCGCCTGTCACTT GAAGAAATGATGGTGCAGTCGGAGAAAATGCTCTCTGTTGGCGGACTGGCCGCCGGCATGGCTCACGAAATCAACAACCCGCTGGGAGCGATCCTGCACA ACGTGCAGAACATTCGTCGGCGATTGTCCCCGGATTTGCCGAAAAACCTGGAGCACGCCGAACAACTGGGTGTCGAACTGGATACGATCAACCGCTACCT GCAAAGCCGCGAAGTCCCGCAACTGCTCGACGGCATCCAGCAAGCCGGCGCCCGCGCGGCGAAAATCGTCACCCATATGCTCAGTTTCAGCCGCCGTAGC AACCGCCAGATGGCGCCTTGCGACCTGCCAGCCCTGATCGACCAGGCCGTGGAGATCGCCGGTAACGATTTCGACCTGGCCATCGGCTTCGACTTCAAGG GCCAGGCGATCATTCGCCAGTTCGACCCGCTGCTGGGCCCGGTGCCGGGCACCGCCAACGAGCTGGAACAGGTGTTGCTCAACCTGCTGAAAAACGCCGC CCAGGCCATCCACCTGCGCGAAGACGACAGCGAGCCTGGACGCATCACCCTGCGCACCCGGCTCAACCCGCCCTGGGCCGAGATCCAGGTGGAGGACAAT GGCATCGGCATGAGCGAGAACGTGCGCAAACGCACCTTCGAGCCCTTCTTCACCACCAAGGAAATCGGCCAGGGCACAGGGTTGGGTTTGTCGGTCTCAT ATTTCATCATCACCAACAATCACAAGGGCCAGATGGAGGTTCACTCCACCCTGGGCCAAGGCACCTGTTTCACCTTGCGCCTGCCGCTGGCTGGCAGCCA GCTTGCCCCCCACGAACTGACTCAACTGGAGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCATGGGCTTTCGCCTGTCGAAAATTTATACCCGTACCGGCGACAAGGGTGAAACCGGCCTGGGCGACGGGCGCCGCGTGCCCAAGGATCATCCTCGGGT GGAAGCGATCGGCGAAGTGGACAGCCTCAACAGCCAACTGGGCTTGCTGTTGGCCGGCCTTGAAGAACAGAGCGGGCAACATCCAGCGCTCAAGGATGTG ATTGAGGTCCTGACTCCGTGCCAGCATCGACTGTTTGACCTGGGCGGAGAGCTGGCGATGCCGGTCTACAAGGCGCTGAATGCGGGCGAGGTGGATCGGC TGGAAGCGGCGATTGATCGCTGGAATGAAGAAGTCGGGCCGCTGGAGAACTTCATCCTGCCCGGCGGTTCAGCGCTGATTGCCCAGGCCCATGTTTGCCG CAGCCTGGCCCGCAGCGCCGAGCGGCGGTGCCAGCAATTGAATGCGCTGGAGCCGTTGGAGGGGGTGGGGCTGGCCTATATCAATCGGCTGTCGGACTTG
Amino Acid Sequence
>histidine kinase
MPLRQRLENLPVGQKLLAALLVLLTTVLLVANLTFISAAYWISQESMAPQALQAIGRLVSNPALAAQALDSPAKADALLNELTSYSPLRAAALYDGEGSR LAQLQQGDRLQLPAHYRDIEAWRVTEFRSNQVITLPRPGLPSGHLLLVASSELPVAFYTGTLTASLGILIFSVLLWMIIARQIKRLITRPIHELEELSRQ VTREENYALRAGRGNHDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQAAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTRLGEALNQPIFLAFEPLKPYLPQLKATVEQHTVERIERVTWIKDDEPKHYALTFYPLMGGAGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPDLPKNLEHAEQLGVELDTINRYLQSREVPQLLDGIQQAGARAAKIVTHMLSFSRRS NRQMAPCDLPALIDQAVEIAGNDFDLAIGFDFKGQAIIRQFDPLLGPVPGTANELEQVLLNLLKNAAQAIHLREDDSEPGRITLRTRLNPPWAEIQVEDN GIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVHSTLGQGTCFTLRLPLAGSQLAPHELTQLEH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site